plant fiber metagenome (ID 335650) - BioProject

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Accession: PRJNA335650 ID: 335650

plant fiber metagenome

Genomes from bacterial community isolated from plant biomass-degrading consortium

See Genome Information for Chitinophaga

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51 additional projects are related by organism.

This project comprises the whole metagenome sequencing (WMS) of the CB10 bacterial community with a hydrolytic activity in carboxymethyl cellulose (CMC), isolated from a bacterial degradation consortium of plant biomass (SCB). More...

Accession	PRJNA335650
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	plant fiber metagenome[Taxonomy ID: 2819232] unclassified sequences; metagenomes; organismal metagenomes; plant fiber metagenome
Submission	Registration date: 9-Nov-2016 Univ Estadual Paulista UNESP/FCAV
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	3
SRA Experiments	2
Other datasets
BioSample	5
Assembly	3

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

2
1
3

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_001870995.2	MLAV00000000	SAMN05582878	CB10	Chitinophaga sp. CB10
GCA_002216255.2	NJGX00000000	SAMN07197444	CB10	Labrys sp. CB10b_03
GCA_002216225.2	NJGW00000000	SAMN07198329	CB10	Pandoraea sp. CB10b_02

SRA Data Details

Parameter	Value
Data volume, Gbases	16
Data volume, Mbytes	10596

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plant fiber metagenome

Genomes from bacterial community isolated from plant biomass-degrading consortium

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