ID 702937 - BioProject

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Accession: PRJNA702937 ID: 702937

Activity-based single-cell genomes from oceanic crustal fluid captures similar information to metagenomic and metatranscriptomic surveys with orders of magnitude less sampling

Redox-Sensor Green, an indicator of cellular redox activity, was added to crustal fluids from CORK U1383C-Deep at North Pond, Mid-Atlantic Ridge. More...

Accession	PRJNA702937
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 19-Feb-2021 Bigelow Laboratory For Ocean Sciences
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	97
Other datasets
BioSample	131
Assembly	97

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

97
97

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_017114195.1	JAFIVT000000000	SAMN17985274	AH-315-P05	Acidimicrobiaceae bacterium AH-315-P05
GCA_017113965.1	JAFIUH000000000	SAMN17985275	AH-315-J10	Acidimicrobium ferrooxidans
GCA_017113565.1	JAFIUU000000000	SAMN17985276	AH-315-K11	Acidimicrobium ferrooxidans
GCA_017116035.1	JAFITS000000000	SAMN17985305	AH-315-G08	Ahrensia sp. AH-315-G08
GCA_017114045.1	JAFITX000000000	SAMN17985295	AH-315-G20	Alkaliphilus sp. AH-315-G20
GCA_017116265.1	JAFITM000000000	SAMN17985296	AH-315-F20	Alkaliphilus transvaalensis
GCA_017114005.1	JAFITZ000000000	SAMN17985278	AH-315-I05	Bacteroidales bacterium AH-315-I05
GCA_017114285.1	JAFIVN000000000	SAMN17985279	AH-315-N07	Bacteroidales bacterium AH-315-N07
GCA_017116425.1	JAFISW000000000	SAMN17985322	AH-315-D14	Beggiatoa alba
GCA_017116225.1	JAFITP000000000	SAMN17985323	AH-315-G03	Beggiatoa alba
GCA_017116535.1	JAFISU000000000	SAMN17985321	AH-315-C22	Beggiatoa alba
GCA_017116555.1	JAFISR000000000	SAMN17985320	AH-315-C10	Beggiatoa alba
GCA_017116675.1	JAFISO000000000	SAMN17985293	AH-315-C05	Caldithrix abyssi
GCA_017115865.1	JAFITU000000000	SAMN17985280	AH-315-G10	Candidatus Amoebophilus asiaticus
GCA_017113985.1	JAFITY000000000	SAMN17985319	AH-315-I02	Cardiobacterium sp. AH-315-I02
GCA_017116315.1	JAFITK000000000	SAMN17985283	AH-315-F07	Crocinitomix catalasitica
GCA_017116165.1	JAFITG000000000	SAMN17985282	AH-315-E19	Crocinitomix catalasitica
GCA_017113145.1	JAFIVD000000000	SAMN17985281	AH-315-L13	Cytophagaceae bacterium AH-315-L13
GCA_017113785.1	JAFIUI000000000	SAMN17985292	AH-315-J11	Dehalococcoides mccartyi
GCA_017114025.1	JAFITW000000000	SAMN17985291	AH-315-G19	Dehalococcoides mccartyi
GCA_017113215.1	JAFIVI000000000	SAMN17985309	AH-315-M07	Desulfobulbus sp. AH-315-M07
GCA_017115935.1	JAFITT000000000	SAMN17985310	AH-315-G09	Desulfocapsa sp. AH-315-G09
GCA_017113025.1	JAFIUK000000000	SAMN17985311	AH-315-J15	Desulfocapsa sp. AH-315-J15
GCA_017113795.1	JAFIUF000000000	SAMN17985315	AH-315-J02	Desulfotalea psychrophila
GCA_017115765.1	JAFITJ000000000	SAMN17985313	AH-315-F05	Desulfotalea psychrophila
GCA_017116205.1	JAFITO000000000	SAMN17985314	AH-315-G02	Desulfotalea psychrophila
GCA_017113195.1	JAFIUJ000000000	SAMN17985331	AH-315-J14	Endomicrobium sp. AH-315-J14
GCA_017116645.1	JAFISL000000000	SAMN17985401	AH-315-B10	Flavobacteriaceae bacterium AH-315-B10
GCA_017113365.1	JAFIVR000000000	SAMN17985286	AH-315-O20	Flavobacteriaceae bacterium AH-315-O20
GCA_017116085.1	JAFITH000000000	SAMN17985287	AH-315-E23	Flavobacteriales bacterium AH-315-E23
GCA_017116525.1	JAFIST000000000	SAMN17985324	AH-315-C21	Gammaproteobacteria bacterium AH-315-C21
GCA_017116145.1	JAFITF000000000	SAMN17985316	AH-315-E17	Gammaproteobacteria bacterium AH-315-E17
GCA_017114465.1	JAFIUV000000000	SAMN17985325	AH-315-K14	Gammaproteobacteria bacterium AH-315-K14
GCA_017114265.1	JAFIVL000000000	SAMN17985326	AH-315-M22	Gammaproteobacteria bacterium AH-315-M22
GCA_017116435.1	JAFISX000000000	SAMN17985297	AH-315-D16	Gemmatimonas aurantiaca
GCA_017114405.1	JAFIUZ000000000	SAMN17985318	AH-315-K21	Haliea sp. AH-315-K21
GCA_017115925.1	JAFISI000000000	SAMN17985327	AH-315-A15	Mariprofundus ferrooxydans
GCA_017116325.1	JAFITE000000000	SAMN17985329	AH-315-E14	Mariprofundus ferrooxydans
GCA_017116405.1	JAFISZ000000000	SAMN17985328	AH-315-D22	Mariprofundus ferrooxydans
GCA_017114325.1	JAFIUL000000000	SAMN17985330	AH-315-J17	Mariprofundus ferrooxydans
GCA_017113085.1	JAFIVX000000000	SAMN17985273	AH-315-P14	Nitrosarchaeum koreense
GCA_017116505.1	JAFISV000000000	SAMN17985298	AH-315-D06	Nitrospina gracilis
GCA_017114105.1	JAFIVG000000000	SAMN17985300	AH-315-M02	Nitrospira defluvii
GCA_017114385.1	JAFIUX000000000	SAMN17985299	AH-315-K17	Nitrospira defluvii
GCA_017114145.1	JAFIVS000000000	SAMN17985306	AH-315-P02	Oceanicaulis sp. AH-315-P02
GCA_017116245.1	JAFITN000000000	SAMN17985284	AH-315-F22	Olleya sp. AH-315-F22
GCA_017114165.1	JAFIUP000000000	SAMN17985285	AH-315-K02	Olleya sp. AH-315-K02
GCA_017114365.1	JAFIVB000000000	SAMN17985304	AH-315-K23	Parvibaculum lavamentivorans
GCA_017116705.1	JAFISM000000000	SAMN17985302	AH-315-B13	Phycisphaeraceae bacterium AH-315-B13
GCA_017113925.1	JAFIUD000000000	SAMN17985303	AH-315-I19	Planctomycetaceae bacterium AH-315-I19
GCA_017113645.1	JAFIUR000000000	SAMN17985317	AH-315-K04	Pseudoalteromonas haloplanktis
GCA_017113105.1	JAFIVZ000000000	SAMN17985308	AH-315-P19	Rhodospirillaceae bacterium AH-315-P19
GCA_017113625.1	JAFIUT000000000	SAMN17985277	AH-315-K08	Rhodothermus sp. AH-315-K08
GCA_017114345.1	JAFIVA000000000	SAMN17985290	AH-315-K22	Roseiflexus sp. AH-315-K22
GCA_017116025.1	JAFITR000000000	SAMN17985289	AH-315-G07	Simkania negevensis
GCA_017113165.1	JAFIVC000000000	SAMN17985288	AH-315-L07	Sphingobacteriaceae bacterium AH-315-L07
GCA_017116375.1	JAFITA000000000	SAMN17985294	AH-315-E05	Sulfobacillus acidophilus
GCA_017114235.1	JAFIVK000000000	SAMN17985272	AH-315-M20	archaeon AH-315-M20
GCA_017115895.1	JAFISH000000000	SAMN17985332	AH-315-A03	bacterium AH-315-A03
GCA_017116745.1	JAFISJ000000000	SAMN17985334	AH-315-A23	bacterium AH-315-A23
GCA_017116725.1	JAFISK000000000	SAMN17985336	AH-315-B06	bacterium AH-315-B06
GCA_017116665.1	JAFISN000000000	SAMN17985339	AH-315-B15	bacterium AH-315-B15
GCA_017116625.1	JAFISP000000000	SAMN17985340	AH-315-C07	bacterium AH-315-C07
GCA_017116605.1	JAFISQ000000000	SAMN17985341	AH-315-C08	bacterium AH-315-C08
GCA_017116545.1	JAFISS000000000	SAMN17985343	AH-315-C20	bacterium AH-315-C20
GCA_017116465.1	JAFISY000000000	SAMN17985344	AH-315-D21	bacterium AH-315-D21
GCA_017116475.1	JAFITB000000000	SAMN17985346	AH-315-E07	bacterium AH-315-E07
GCA_017116365.1	JAFITC000000000	SAMN17985348	AH-315-E09	bacterium AH-315-E09
GCA_017116305.1	JAFITD000000000	SAMN17985349	AH-315-E10	bacterium AH-315-E10
GCA_017116185.1	JAFITI000000000	SAMN17985352	AH-315-F03	bacterium AH-315-F03
GCA_017116285.1	JAFITL000000000	SAMN17985355	AH-315-F18	bacterium AH-315-F18
GCA_017116125.1	JAFITQ000000000	SAMN17985358	AH-315-G05	bacterium AH-315-G05
GCA_017114085.1	JAFITV000000000	SAMN17985359	AH-315-G11	bacterium AH-315-G11
GCA_017114055.1	JAFIUA000000000	SAMN17985361	AH-315-I07	bacterium AH-315-I07
GCA_017113945.1	JAFIUB000000000	SAMN17985362	AH-315-I11	bacterium AH-315-I11
GCA_017113845.1	JAFIUC000000000	SAMN17985363	AH-315-I18	bacterium AH-315-I18
GCA_017113905.1	JAFIUE000000000	SAMN17985364	AH-315-I20	bacterium AH-315-I20
GCA_017113825.1	JAFIUG000000000	SAMN17985365	AH-315-J04	bacterium AH-315-J04
GCA_017114225.1	JAFIUM000000000	SAMN17985367	AH-315-J19	bacterium AH-315-J19
GCA_017113065.1	JAFIUN000000000	SAMN17985368	AH-315-J21	bacterium AH-315-J21
GCA_017113375.1	JAFIUO000000000	SAMN17985369	AH-315-J23	bacterium AH-315-J23
GCA_017113405.1	JAFIUQ000000000	SAMN17985370	AH-315-K03	bacterium AH-315-K03
GCA_017113725.1	JAFIUS000000000	SAMN17985371	AH-315-K05	bacterium AH-315-K05
GCA_017114445.1	JAFIUW000000000	SAMN17985372	AH-315-K15	bacterium AH-315-K15
GCA_017114415.1	JAFIUY000000000	SAMN17985375	AH-315-K20	bacterium AH-315-K20
GCA_017113095.1	JAFIVE000000000	SAMN17985378	AH-315-L15	bacterium AH-315-L15
GCA_017113175.1	JAFIVF000000000	SAMN17985380	AH-315-L21	bacterium AH-315-L21
GCA_017113585.1	JAFIVH000000000	SAMN17985382	AH-315-M05	bacterium AH-315-M05
GCA_017113305.1	JAFIVJ000000000	SAMN17985383	AH-315-M10	bacterium AH-315-M10
GCA_017114305.1	JAFIVM000000000	SAMN17985386	AH-315-N03	bacterium AH-315-N03
GCA_017113045.1	JAFIVO000000000	SAMN17985387	AH-315-N14	bacterium AH-315-N14
GCA_017113445.1	JAFIVP000000000	SAMN17985389	AH-315-N22	bacterium AH-315-N22
GCA_017113485.1	JAFIVQ000000000	SAMN17985393	AH-315-O15	bacterium AH-315-O15
GCA_017114185.1	JAFIVU000000000	SAMN17985395	AH-315-P07	bacterium AH-315-P07
GCA_017114495.1	JAFIVV000000000	SAMN17985397	AH-315-P11	bacterium AH-315-P11
GCA_017114485.1	JAFIVW000000000	SAMN17985398	AH-315-P13	bacterium AH-315-P13
GCA_017114115.1	JAFIVY000000000	SAMN17985399	AH-315-P15	bacterium AH-315-P15

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Activity-based single-cell genomes from oceanic crustal fluid captures similar information to metagenomic and metatranscriptomic surveys with orders of magnitude less sampling

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