gut metagenome (ID 675294) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from BioSample

Accession: PRJNA675294 ID: 675294

gut metagenome

Metagenomic sequencing of cecum microbiota of artificial sweetener consuming dams and their weanling offspring

Cecum microbiome (shotgun + 16S rRNA gene sequencing ) of artificial sweetener consuming rats and their weanling offspring

Accession	PRJNA675294
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	gut metagenome[Taxonomy ID: 749906] unclassified sequences; metagenomes; organismal metagenomes; gut metagenome
Publications	Wang W et al., "A Metagenomics Investigation of Intergenerational Effects of Non-nutritive Sweeteners on Gut Microbiome.", Front Nutr, 2021;8:795848
Submission	Registration date: 1-Feb-2022 - University of Calgary - Raylene Reimer - Weilan Wang

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	187
SRA Experiments	141
Publications
PubMed	1
PMC	1
Other datasets
BioSample	328
Assembly	187

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

187
187

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_021771895.1	JAETNZ000000000	SAMN16706398	S11_Bin3	Acetatifactor muris
GCA_021770215.1	JAETRJ000000000	SAMN16706486	S29_Bin9	Acetatifactor muris
GCA_021768105.1	JAETOK000000000	SAMN16706409	S13_Bin2	Acetobacter sp.
GCA_021771405.1	JAETPC000000000	SAMN16706427	S19_Bin5	Actinomycetes bacterium
GCA_021768145.1	JAETOD000000000	SAMN16706402	S11_Bin7	Adlercreutzia sp.
GCA_021770745.1	JAETQJ000000000	SAMN16706460	S26_Bin5	Adlercreutzia sp.
GCA_021770645.1	JAETQN000000000	SAMN16706464	S27_Bin1	Akkermansia muciniphila
GCA_021769665.1	JAETSL000000000	SAMN16706514	S32_Bin5	Alistipes finegoldii
GCA_021770025.1	JAETRT000000000	SAMN16706496	S30_Bin5	Alistipes sp.
GCA_021769125.1	JAETTL000000000	SAMN16706540	S4_Bin3	Anaerotruncus colihominis
GCA_021768745.1	JAETUF000000000	SAMN16706560	S7_Bin3	Anaerotruncus colihominis
GCA_021768545.1	JAETUP000000000	SAMN16706570	S9_Bin5	Anaerotruncus colihominis
GCA_021768645.1	JAETUK000000000	SAMN16706565	S8_Bin3	Anaerotruncus sp.
GCA_021769095.1	JAETTO000000000	SAMN16706543	S4_Bin6	Anaerotruncus sp.
GCA_021770005.1	JAETRV000000000	SAMN16706498	S30_Bin7	Anaerotruncus sp.
GCA_021768805.1	JAETUC000000000	SAMN16706557	S6_Bin4	Azospirillum sp.
GCA_021768085.1	JAETOJ000000000	SAMN16706408	S13_Bin1	Bacillota bacterium
GCA_021768225.1	JAETNN000000000	SAMN16706386	S1_Bin3	Bacillota bacterium
GCA_021768705.1	JAETUG000000000	SAMN16706561	S7_Bin4	Bacillota bacterium
GCA_021769035.1	JAETTP000000000	SAMN16706544	S4_Bin7	Bacillota bacterium
GCA_021768985.1	JAETTR000000000	SAMN16706546	S4_Bin9	Bacillota bacterium
GCA_021768905.1	JAETTY000000000	SAMN16706553	S5_Bin6	Bacillota bacterium
GCA_021768885.1	JAETTW000000000	SAMN16706551	S5_Bin4	Bacillota bacterium
GCA_021768655.1	JAETUI000000000	SAMN16706563	S8_Bin1	Bacillota bacterium
GCA_021769165.1	JAETTI000000000	SAMN16706537	S36_Bin4	Bacillota bacterium
GCA_021769325.1	JAETTC000000000	SAMN16706531	S35_Bin6	Bacillota bacterium
GCA_021769295.1	JAETTD000000000	SAMN16706532	S35_Bin7	Bacillota bacterium
GCA_021769675.1	JAETSM000000000	SAMN16706515	S32_Bin6	Bacillota bacterium
GCA_021769445.1	JAETSW000000000	SAMN16706525	S34_Bin4	Bacillota bacterium
GCA_021769925.1	JAETRX000000000	SAMN16706500	S30_Bin9	Bacillota bacterium
GCA_021769885.1	JAETSA000000000	SAMN16706503	S31_Bin1	Bacillota bacterium
GCA_021769745.1	JAETSH000000000	SAMN16706510	S32_Bin1	Bacillota bacterium
GCA_021770185.1	JAETRL000000000	SAMN16706488	S29_Bin11	Bacillota bacterium
GCA_021770305.1	JAETRF000000000	SAMN16706482	S29_Bin5	Bacillota bacterium
GCA_021770705.1	JAETQK000000000	SAMN16706461	S26_Bin6	Bacillota bacterium
GCA_021770505.1	JAETQX000000000	SAMN16706474	S27_Bin11	Bacillota bacterium
GCA_021770475.1	JAETQV000000000	SAMN16706472	S27_Bin9	Bacillota bacterium
GCA_021770445.1	JAETQY000000000	SAMN16706475	S28_Bin1	Bacillota bacterium
GCA_021771115.1	JAETPP000000000	SAMN16706440	S21_Bin8	Bacillota bacterium
GCA_021771105.1	JAETPS000000000	SAMN16706443	S23_Bin1	Bacillota bacterium
GCA_021770865.1	JAETQE000000000	SAMN16706455	S25_Bin4	Bacillota bacterium
GCA_021770805.1	JAETQG000000000	SAMN16706457	S26_Bin2	Bacillota bacterium
GCA_021771185.1	JAETPN000000000	SAMN16706438	S21_Bin6	Bacillota bacterium
GCA_021771915.1	JAETNY000000000	SAMN16706397	S11_Bin2	Bacillota bacterium
GCA_021771835.1	JAETOC000000000	SAMN16706401	S11_Bin6	Bacillota bacterium
GCA_021770145.1	JAETRO000000000	SAMN16706491	S3_Bin2	Bacteroidaceae bacterium
GCA_021769705.1	JAETSJ000000000	SAMN16706512	S32_Bin3	Bacteroidaceae bacterium
GCA_021768245.1	JAETNO000000000	SAMN16706387	S10_Bin1	Bacteroidaceae bacterium
GCA_021771535.1	JAETOV000000000	SAMN16706420	S18_Bin2	Bacteroidaceae bacterium
GCA_021771205.1	JAETPL000000000	SAMN16706436	S21_Bin4	Bacteroidaceae bacterium
GCA_021768865.1	JAETTZ000000000	SAMN16706554	S6_Bin1	Bacteroides sp.
GCA_021771575.1	JAETOX000000000	SAMN16706422	S18_Bin4	Bacteroides sp.
GCA_021770365.1	JAETRC000000000	SAMN16706479	S29_Bin2	Bacteroidota bacterium
GCA_021768115.1	JAETOG000000000	SAMN16706405	S12_Bin3	Bacteroidota bacterium
GCA_021770165.1	JAETRK000000000	SAMN16706487	S29_Bin10	Bifidobacterium pseudolongum
GCA_021770895.1	JAETQB000000000	SAMN16706452	S25_Bin1	Blautia sp.
GCA_021770465.1	JAETQW000000000	SAMN16706473	S27_Bin10	Blautia sp.
GCA_021768915.1	JAETTX000000000	SAMN16706552	S5_Bin5	Blautia sp.
GCA_021771375.1	JAETPF000000000	SAMN16706430	S20_Bin2	Blautia sp.
GCA_021772055.1	JAETNR000000000	SAMN16706390	S10_Bin4	Blautia sp.
GCA_021768625.1	JAETUM000000000	SAMN16706567	S9_Bin2	Candidatus Stoquefichus sp.
GCA_021770685.1	JAETQM000000000	SAMN16706463	S26_Bin8	Candidatus Stoquefichus sp.
GCA_021770425.1	JAETRA000000000	SAMN16706477	S28_Bin3	Clostridiaceae bacterium
GCA_021771025.1	JAETPW000000000	SAMN16706447	S24_Bin1	Clostridiaceae bacterium
GCA_021769985.1	JAETRW000000000	SAMN16706499	S30_Bin8	Clostridiaceae bacterium
GCA_021769555.1	JAETSR000000000	SAMN16706520	S33_Bin4	Clostridiaceae bacterium
GCA_021768945.1	JAETTU000000000	SAMN16706549	S5_Bin2	Clostridiales bacterium
GCA_021770515.1	JAETQU000000000	SAMN16706471	S27_Bin8	Clostridiales bacterium
GCA_021768205.1	JAETNL000000000	SAMN16706384	S1_Bin1	Clostridiales bacterium
GCA_021771245.1	JAETPJ000000000	SAMN16706434	S21_Bin2	Clostridiales bacterium
GCA_021770825.1	JAETQD000000000	SAMN16706454	S25_Bin3	Clostridium sp.
GCA_021770885.1	JAETQC000000000	SAMN16706453	S25_Bin2	Clostridium sp.
GCA_021769905.1	JAETRY000000000	SAMN16706501	S30_Bin10	Clostridium sp.
GCA_021768955.1	JAETTV000000000	SAMN16706550	S5_Bin3	Clostridium sp.
GCA_021771305.1	JAETPG000000000	SAMN16706431	S20_Bin3	Clostridium sp.
GCA_021771285.1	JAETPI000000000	SAMN16706433	S21_Bin1	Clostridium sp.
GCA_021769585.1	JAETSO000000000	SAMN16706517	S33_Bin1	Dorea sp.
GCA_021769845.1	JAETSD000000000	SAMN16706506	S31_Bin4	Dorea sp.
GCA_021770315.1	JAETRE000000000	SAMN16706481	S29_Bin4	Dorea sp.
GCA_021771875.1	JAETOB000000000	SAMN16706400	S11_Bin5	Dorea sp.
GCA_021771725.1	JAETOM000000000	SAMN16706411	S14_Bin2	Dorea sp.
GCA_021769355.1	JAETTA000000000	SAMN16706529	S35_Bin4	Eisenbergiella tayi
GCA_021771345.1	JAETPE000000000	SAMN16706429	S20_Bin1	Enorma sp.
GCA_021769245.1	JAETTG000000000	SAMN16706535	S36_Bin2	Enorma sp.
GCA_021769025.1	JAETTS000000000	SAMN16706547	S4_Bin10	Enterocloster bolteae
GCA_021769485.1	JAETSU000000000	SAMN16706523	S34_Bin2	Enterocloster bolteae
GCA_021771435.1	JAETOZ000000000	SAMN16706424	S19_Bin2	Enterocloster bolteae
GCA_021772025.1	JAETNT000000000	SAMN16706392	S10_Bin6	Enterocloster bolteae
GCA_021770955.1	JAETQA000000000	SAMN16706451	S24_Bin5	Enterococcus gallinarum
GCA_021770925.1	JAETPY000000000	SAMN16706449	S24_Bin3	Erysipelotrichaceae bacterium
GCA_021770605.1	JAETQP000000000	SAMN16706466	S27_Bin3	Erysipelotrichaceae bacterium
GCA_021769225.1	JAETTH000000000	SAMN16706536	S36_Bin3	Erysipelotrichaceae bacterium
GCA_021768605.1	JAETUN000000000	SAMN16706568	S9_Bin3	Erysipelotrichaceae bacterium
GCA_021771655.1	JAETOR000000000	SAMN16706416	S16_Bin1	Escherichia coli
GCA_021770555.1	JAETQQ000000000	SAMN16706467	S27_Bin4	Eubacteriaceae bacterium
GCA_021770095.1	JAETRQ000000000	SAMN16706493	S30_Bin2	Eubacteriaceae bacterium
GCA_021769965.1	JAETRU000000000	SAMN16706497	S30_Bin6	Eubacterium sp.
GCA_021769545.1	JAETSS000000000	SAMN16706521	S33_Bin5	Eubacterium sp.
GCA_021769425.1	JAETSX000000000	SAMN16706526	S35_Bin1	Eubacterium sp.
GCA_021771945.1	JAETNV000000000	SAMN16706394	S10_Bin8	Eubacterium sp.
GCA_021769265.1	JAETTE000000000	SAMN16706533	S35_Bin8	Faecalibaculum rodentium
GCA_021769765.1	JAETSG000000000	SAMN16706509	S31_Bin7	Flavonifractor plautii
GCA_021770945.1	JAETPZ000000000	SAMN16706450	S24_Bin4	Flavonifractor plautii
GCA_021771795.1	JAETOF000000000	SAMN16706404	S12_Bin2	Flavonifractor plautii
GCA_021771595.1	JAETOS000000000	SAMN16706417	S16_Bin2	Gordonibacter pamelaeae
GCA_021770985.1	JAETPV000000000	SAMN16706446	S23_Bin4	Holdemania filiformis
GCA_021771495.1	JAETOY000000000	SAMN16706423	S19_Bin1	Hungatella hathewayi
GCA_021770065.1	JAETRR000000000	SAMN16706494	S30_Bin3	Lachnoclostridium sp.
GCA_021769805.1	JAETSF000000000	SAMN16706508	S31_Bin6	Lachnospiraceae bacterium
GCA_021770075.1	JAETRP000000000	SAMN16706492	S30_Bin1	Lachnospiraceae bacterium
GCA_021770205.1	JAETRM000000000	SAMN16706489	S29_Bin12	Lachnospiraceae bacterium
GCA_021770345.1	JAETRD000000000	SAMN16706480	S29_Bin3	Lachnospiraceae bacterium
GCA_021770265.1	JAETRH000000000	SAMN16706484	S29_Bin7	Lachnospiraceae bacterium
GCA_021770245.1	JAETRI000000000	SAMN16706485	S29_Bin8	Lachnospiraceae bacterium
GCA_021770785.1	JAETQH000000000	SAMN16706458	S26_Bin3	Lachnospiraceae bacterium
GCA_021770755.1	JAETQI000000000	SAMN16706459	S26_Bin4	Lachnospiraceae bacterium
GCA_021770615.1	JAETQR000000000	SAMN16706468	S27_Bin5	Lachnospiraceae bacterium
GCA_021770565.1	JAETQS000000000	SAMN16706469	S27_Bin6	Lachnospiraceae bacterium
GCA_021770725.1	JAETQL000000000	SAMN16706462	S26_Bin7	Lachnospiraceae bacterium
GCA_021769385.1	JAETSY000000000	SAMN16706527	S35_Bin2	Lachnospiraceae bacterium
GCA_021769135.1	JAETTM000000000	SAMN16706541	S4_Bin4	Lachnospiraceae bacterium
GCA_021768765.1	JAETUD000000000	SAMN16706558	S7_Bin1	Lachnospiraceae bacterium
GCA_021771065.1	JAETPT000000000	SAMN16706444	S23_Bin2	Lachnospiraceae bacterium
GCA_021771755.1	JAETOL000000000	SAMN16706410	S14_Bin1	Lachnospiraceae bacterium
GCA_021771695.1	JAETON000000000	SAMN16706412	S14_Bin3	Lachnospiraceae bacterium
GCA_021771985.1	JAETNW000000000	SAMN16706395	S10_Bin9	Lachnospiraceae bacterium
GCA_021772075.1	JAETNQ000000000	SAMN16706389	S10_Bin3	Lachnospiraceae bacterium
GCA_021768835.1	JAETUB000000000	SAMN16706556	S6_Bin3	Lactobacillus intestinalis
GCA_021769495.1	JAETST000000000	SAMN16706522	S34_Bin1	Lactobacillus johnsonii
GCA_021770385.1	JAETRB000000000	SAMN16706478	S29_Bin1	Lactobacillus taiwanensis
GCA_021770125.1	JAETRN000000000	SAMN16706490	S3_Bin1	Lactobacillus taiwanensis
GCA_021768165.1	JAETOI000000000	SAMN16706407	S12_Bin5	Lactococcus garvieae
GCA_021771605.1	JAETOT000000000	SAMN16706418	S17_Bin1	Ligilactobacillus murinus
GCA_021770035.1	JAETRS000000000	SAMN16706495	S30_Bin4	Limosilactobacillus reuteri
GCA_021771035.1	JAETPU000000000	SAMN16706445	S23_Bin3	Marvinbryantia formatexigens
GCA_021768575.1	JAETUO000000000	SAMN16706569	S9_Bin4	Mediterraneibacter gnavus
GCA_021768785.1	JAETUE000000000	SAMN16706559	S7_Bin2	Muribaculum intestinale
GCA_021771515.1	JAETOW000000000	SAMN16706421	S18_Bin3	Oscillibacter sp.
GCA_021768825.1	JAETUA000000000	SAMN16706555	S6_Bin2	Oscillibacter sp.
GCA_021769945.1	JAETRZ000000000	SAMN16706502	S30_Bin11	Oscillibacter sp.
GCA_021769865.1	JAETSB000000000	SAMN16706504	S31_Bin2	Oscillospiraceae bacterium
GCA_021769725.1	JAETSI000000000	SAMN16706511	S32_Bin2	Oscillospiraceae bacterium
GCA_021770285.1	JAETRG000000000	SAMN16706483	S29_Bin6	Oscillospiraceae bacterium
GCA_021770845.1	JAETQF000000000	SAMN16706456	S26_Bin1	Oscillospiraceae bacterium
GCA_021769455.1	JAETSV000000000	SAMN16706524	S34_Bin3	Oscillospiraceae bacterium
GCA_021769525.1	JAETSQ000000000	SAMN16706519	S33_Bin3	Oscillospiraceae bacterium
GCA_021769175.1	JAETTK000000000	SAMN16706539	S4_Bin2	Oscillospiraceae bacterium
GCA_021768185.1	JAETNP000000000	SAMN16706388	S10_Bin2	Oscillospiraceae bacterium
GCA_021771265.1	JAETPK000000000	SAMN16706435	S21_Bin3	Oscillospiraceae bacterium
GCA_021771635.1	JAETOQ000000000	SAMN16706415	S15_Bin1	Oscillospiraceae bacterium
GCA_021771675.1	JAETOP000000000	SAMN16706414	S14_Bin5	Oscillospiraceae bacterium
GCA_021771715.1	JAETOO000000000	SAMN16706413	S14_Bin4	Oscillospiraceae bacterium
GCA_021771975.1	JAETNU000000000	SAMN16706393	S10_Bin7	Oscillospiraceae bacterium
GCA_021771935.1	JAETNX000000000	SAMN16706396	S11_Bin1	Oscillospiraceae bacterium
GCA_021768555.1	JAETUL000000000	SAMN16706566	S9_Bin1	Parabacteroides goldsteinii
GCA_021769345.1	JAETTB000000000	SAMN16706530	S35_Bin5	Peptostreptococcaceae bacterium
GCA_021772015.1	JAETNS000000000	SAMN16706391	S10_Bin5	Prevotellaceae bacterium
GCA_021768265.1	JAETNM000000000	SAMN16706385	S1_Bin2	Prevotellaceae bacterium
GCA_021769005.1	JAETTT000000000	SAMN16706548	S5_Bin1	Prevotellaceae bacterium
GCA_021769595.1	JAETSP000000000	SAMN16706518	S33_Bin2	Prevotellaceae bacterium
GCA_021769085.1	JAETTN000000000	SAMN16706542	S4_Bin5	Prevotellaceae bacterium
GCA_021770545.1	JAETQT000000000	SAMN16706470	S27_Bin7	Prevotellaceae bacterium
GCA_021770405.1	JAETQZ000000000	SAMN16706476	S28_Bin2	Prevotellaceae bacterium
GCA_021769815.1	JAETSC000000000	SAMN16706505	S31_Bin3	Prevotellaceae bacterium
GCA_021769065.1	JAETTQ000000000	SAMN16706545	S4_Bin8	Pseudomonadota bacterium
GCA_021771445.1	JAETPA000000000	SAMN16706425	S19_Bin3	Pseudomonadota bacterium
GCA_021771815.1	JAETOE000000000	SAMN16706403	S12_Bin1	Roseburia hominis
GCA_021768685.1	JAETUJ000000000	SAMN16706564	S8_Bin2	Rothia nasimurium
GCA_021770655.1	JAETQO000000000	SAMN16706465	S27_Bin2	Ruminococcus sp.
GCA_021771225.1	JAETPM000000000	SAMN16706437	S21_Bin5	Ruthenibacterium lactatiformans
GCA_021771395.1	JAETPD000000000	SAMN16706428	S2_Bin1	Ruthenibacterium lactatiformans
GCA_021771315.1	JAETPH000000000	SAMN16706432	S20_Bin4	Ruthenibacterium lactatiformans
GCA_021768725.1	JAETUH000000000	SAMN16706562	S7_Bin5	Schaedlerella arabinosiphila
GCA_021769285.1	JAETTF000000000	SAMN16706534	S36_Bin1	Sutterellaceae bacterium
GCA_021769645.1	JAETSK000000000	SAMN16706513	S32_Bin4	Sutterellaceae bacterium
GCA_021771165.1	JAETPO000000000	SAMN16706439	S21_Bin7	Sutterellaceae bacterium
GCA_021769775.1	JAETSE000000000	SAMN16706507	S31_Bin5	Tannerellaceae bacterium
GCA_021771085.1	JAETPR000000000	SAMN16706442	S22_Bin1	Thomasclavelia ramosa
GCA_021771845.1	JAETOA000000000	SAMN16706399	S11_Bin4	Thomasclavelia ramosa
GCA_021771005.1	JAETPX000000000	SAMN16706448	S24_Bin2	[Clostridium] hylemonae
GCA_021769405.1	JAETSZ000000000	SAMN16706528	S35_Bin3	[Clostridium] innocuum
GCA_021771525.1	JAETOU000000000	SAMN16706419	S18_Bin1	[Clostridium] innocuum
GCA_021771775.1	JAETOH000000000	SAMN16706406	S12_Bin4	[Clostridium] symbiosum
GCA_021771145.1	JAETPQ000000000	SAMN16706441	S21_Bin9	[Clostridium] symbiosum
GCA_021771455.1	JAETPB000000000	SAMN16706426	S19_Bin4	[Clostridium] symbiosum
GCA_021769625.1	JAETSN000000000	SAMN16706516	S32_Bin7	[Clostridium] symbiosum
GCA_021769205.1	JAETTJ000000000	SAMN16706538	S4_Bin1	[Ruminococcus] torques

SRA Data Details

Parameter	Value
Data volume, Gbases	445
Data volume, Tbytes	0.15

BioProject

Result Filters

Display Settings:

Send to:

Links from BioSample

gut metagenome

Metagenomic sequencing of cecum microbiota of artificial sweetener consuming dams and their weanling offspring

Supplemental Content

Related information

Recent activity