permafrost metagenome (ID 588342) - BioProject

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Accession: PRJNA588342 ID: 588342

permafrost metagenome

Chersky soil metagenome

Chersky soil metagenome study

Accession	PRJNA588342
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	permafrost metagenome[Taxonomy ID: 1082480] unclassified sequences; metagenomes; ecological metagenomes; permafrost metagenome
Submission	Registration date: 8-Apr-2021 KOREA POLAR RESEARCH INSTITUTE
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	119
SRA Experiments	64
Other datasets
BioSample	124
Assembly	119

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

119
119

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_017883125.1	JADGOD000000000	SAMN16072657	Chersky_583	Acidimicrobiales bacterium
GCA_017883135.1	JADGOE000000000	SAMN16072658	Chersky.15_37	Acidimicrobiales bacterium
GCA_017883105.1	JADGOF000000000	SAMN16072659	Chersky.15_91	Acidimicrobiales bacterium
GCA_017883075.1	JADGOI000000000	SAMN16072662	Chersky.4_46	Acidimicrobiales bacterium
GCA_017883065.1	JADGOG000000000	SAMN16072660	Chersky.37_4	Acidimicrobiales bacterium
GCA_017883045.1	JADGOJ000000000	SAMN16072663	Chersky.15_6	Acidimicrobiales bacterium
GCA_017882995.1	JADGOL000000000	SAMN16072665	Chersky_840	Acidimicrobiales bacterium
GCA_017883025.1	JADGOH000000000	SAMN16072661	Chersky_362	Acidimicrobiales bacterium
GCA_017882985.1	JADGOK000000000	SAMN16072664	Chersky.2_26	Acidimicrobiales bacterium
GCA_017882945.1	JADGON000000000	SAMN16072667	Chersky_806	Acidimicrobiia bacterium
GCA_017882925.1	JADGOM000000000	SAMN16072666	Chersky_534	Acidimicrobiia bacterium
GCA_017882905.1	JADGOO000000000	SAMN16072668	Chersky_683	Acidimicrobiia bacterium
GCA_017883185.1	JADGOB000000000	SAMN16072655	Chersky.3_23	Acidobacteriota bacterium
GCA_017883165.1	JADGOC000000000	SAMN16072656	Chersky.31_34	Acidobacteriota bacterium
GCA_017882885.1	JADGOQ000000000	SAMN16072670	Chersky_575	Actinomycetales bacterium
GCA_017882935.1	JADGOP000000000	SAMN16072669	Chersky.40_32	Actinomycetota bacterium
GCA_017882145.1	JADGQB000000000	SAMN16072707	Chersky.20_11	Anaerolineales bacterium
GCA_017882125.1	JADGQC000000000	SAMN16072708	Chersky.3_33	Anaerolineales bacterium
GCA_017882065.1	JADGQD000000000	SAMN16072709	Chersky.4_57	Anaerolineales bacterium
GCA_017882045.1	JADGQF000000000	SAMN16072711	Chersky.3_15	Anaerolineales bacterium
GCA_017882245.1	JADGPV000000000	SAMN16072701	Chersky_261	Bacteroidales bacterium
GCA_017882345.1	JADGPT000000000	SAMN16072699	Chersky.15_30	Bacteroidales bacterium
GCA_017882335.1	JADGPR000000000	SAMN16072697	Chersky.15_51	Bacteroidales bacterium
GCA_017882305.1	JADGPU000000000	SAMN16072700	Chersky.21_39	Bacteroidales bacterium
GCA_017882185.1	JADGQA000000000	SAMN16072706	Chersky.3_21	Bacteroidota bacterium
GCA_017883315.1	JADGNW000000000	SAMN16072650	Chersky_418	Blastocatellia bacterium
GCA_017881085.1	JADGRI000000000	SAMN16072740	Chersky.37_22	Bradyrhizobium sp.
GCA_017883415.1	JADGNR000000000	SAMN16072645	Chersky.12_10	Bryobacteraceae bacterium
GCA_017880805.1	JADGRP000000000	SAMN16072747	Chersky_114	Burkholderiales bacterium
GCA_017880775.1	JADGRQ000000000	SAMN16072748	Chersky.31_24	Burkholderiales bacterium
GCA_017880745.1	JADGRR000000000	SAMN16072749	Chersky.17_31	Burkholderiales bacterium
GCA_017880705.1	JADGRS000000000	SAMN16072750	Chersky.9_13	Burkholderiales bacterium
GCA_017883305.1	JADGNU000000000	SAMN16072648	Chersky.35_14	Candidatus Aminicenantes bacterium
GCA_017883285.1	JADGNV000000000	SAMN16072649	Chersky_507	Candidatus Aminicenantes bacterium
GCA_017883585.1	JADGNG000000000	SAMN16072634	Chersky_747	Candidatus Bathyarchaeota archaeon
GCA_017883615.1	JADGNF000000000	SAMN16072633	Chersky_322	Candidatus Bathyarchaeota archaeon
GCA_017882165.1	JADGPZ000000000	SAMN16072705	Chersky.7_45	Candidatus Kapaibacterium sp.
GCA_017882705.1	JADGOZ000000000	SAMN16072679	Chersky_517	Candidatus Nanopelagicales bacterium
GCA_017881075.1	JADGRH000000000	SAMN16072739	Chersky_89	Candidatus Paceibacterota bacterium
GCA_017883355.1	JADGNS000000000	SAMN16072646	Chersky.14_27	Candidatus Solibacter sp.
GCA_017883345.1	JADGNT000000000	SAMN16072647	Chersky.3_40	Candidatus Solibacter sp.
GCA_017883425.1	JADGNP000000000	SAMN16072643	Chersky.24_37	Candidatus Sulfotelmatobacter sp.
GCA_017883385.1	JADGNQ000000000	SAMN16072644	Chersky.8_4	Candidatus Sulfotelmatobacter sp.
GCA_017882855.1	JADGOR000000000	SAMN16072671	Chersky.2_14	Cellulomonas sp.
GCA_017882265.1	JADGPW000000000	SAMN16072702	Chersky_580	Chitinophagaceae bacterium
GCA_017882215.1	JADGPX000000000	SAMN16072703	Chersky.15_85	Chitinophagaceae bacterium
GCA_017882205.1	JADGPY000000000	SAMN16072704	Chersky_373	Chitinophagaceae bacterium
GCA_017882025.1	JADGQG000000000	SAMN16072712	Chersky.10_44	Chloroflexota bacterium
GCA_017881985.1	JADGQH000000000	SAMN16072713	Chersky.27_23	Chloroflexota bacterium
GCA_017881905.1	JADGQI000000000	SAMN16072714	Chersky_267	Chloroflexota bacterium
GCA_017881915.1	JADGQK000000000	SAMN16072716	Chersky.17_25	Chloroflexota bacterium
GCA_017881885.1	JADGQJ000000000	SAMN16072715	Chersky.2_5	Chloroflexota bacterium
GCA_017881705.1	JADGQP000000000	SAMN16072721	Chersky_266	Christensenellaceae bacterium
GCA_017881645.1	JADGQQ000000000	SAMN16072722	Chersky_828	Clostridia bacterium
GCA_017882825.1	JADGOS000000000	SAMN16072672	Chersky.27_6	Demequinaceae bacterium
GCA_017881725.1	JADGQO000000000	SAMN16072720	Chersky_265	Fibrobacteria bacterium
GCA_017882785.1	JADGOV000000000	SAMN16072675	Chersky.23_6	Frankiaceae bacterium
GCA_017882765.1	JADGOW000000000	SAMN16072676	Chersky.28_11	Frankiaceae bacterium
GCA_017882835.1	JADGOU000000000	SAMN16072674	Chersky.15_16	Frankiaceae bacterium
GCA_017880945.1	JADGRM000000000	SAMN16072744	Chersky.3_41	Gallionella sp.
GCA_017880865.1	JADGRL000000000	SAMN16072743	Chersky.15_73	Gallionella sp.
GCA_017881685.1	JADGQR000000000	SAMN16072723	Chersky_446	Gemmatimonadaceae bacterium
GCA_017881465.1	JADGQV000000000	SAMN16072727	Chersky.7_28	Gemmatimonadaceae bacterium
GCA_017881595.1	JADGQT000000000	SAMN16072725	Chersky.31_36	Gemmatimonadaceae bacterium
GCA_017881585.1	JADGQS000000000	SAMN16072724	Chersky.15_25	Gemmatimonadaceae bacterium
GCA_017881545.1	JADGQU000000000	SAMN16072726	Chersky.30_11	Gemmatimonadaceae bacterium
GCA_017881505.1	JADGQW000000000	SAMN16072728	Chersky.24_23	Gemmatimonadales bacterium
GCA_017881445.1	JADGQX000000000	SAMN16072729	Chersky.3_43	Gemmatimonadota bacterium
GCA_017882805.1	JADGOT000000000	SAMN16072673	Chersky_586	Glaciihabitans sp.
GCA_017883605.1	JADGNH000000000	SAMN16072635	Chersky.38_6	Methanobacteriaceae archaeon
GCA_017883565.1	JADGNI000000000	SAMN16072636	Chersky.38_2	Methanobacterium sp.
GCA_017883495.1	JADGNL000000000	SAMN16072639	Chersky_702	Methanomicrobiales archaeon
GCA_017883535.1	JADGNK000000000	SAMN16072638	Chersky.34_13	Methanoregula sp.
GCA_017883485.1	JADGNM000000000	SAMN16072640	Chersky.3_35	Methanosarcina sp.
GCA_017883465.1	JADGNN000000000	SAMN16072641	Chersky.40_19	Methanosarcina sp.
GCA_017880825.1	JADGRN000000000	SAMN16072745	Chersky.10_8	Methylophilaceae bacterium
GCA_017880905.1	JADGRO000000000	SAMN16072746	Chersky_557	Methylotenera sp.
GCA_017882745.1	JADGOX000000000	SAMN16072677	Chersky_398	Mycobacteriaceae bacterium
GCA_017881345.1	JADGQZ000000000	SAMN16072731	Chersky_276	Myxococcaceae bacterium
GCA_017881265.1	JADGRA000000000	SAMN16072732	Chersky_835	Myxococcaceae bacterium
GCA_017882715.1	JADGOY000000000	SAMN16072678	Chersky.9_22	Nakamurella sp.
GCA_017882285.1	JADGPS000000000	SAMN16072698	Chersky.4_43	Paludibacter sp.
GCA_017882685.1	JADGPA000000000	SAMN16072680	Chersky_165	Propionibacteriaceae bacterium
GCA_017882655.1	JADGPB000000000	SAMN16072681	Chersky.17_13	Propionibacteriales bacterium
GCA_017881245.1	JADGRC000000000	SAMN16072734	Chersky_194	Pseudomonadota bacterium
GCA_017881185.1	JADGRE000000000	SAMN16072736	Chersky.17_24	Pseudomonadota bacterium
GCA_017881315.1	JADGRB000000000	SAMN16072733	Chersky.8_6	Pseudomonadota bacterium
GCA_017881285.1	JADGRD000000000	SAMN16072735	Chersky.38_30	Pseudomonadota bacterium
GCA_017881025.1	JADGRJ000000000	SAMN16072741	Chersky.24_15	Rhizobacter sp.
GCA_017880985.1	JADGRK000000000	SAMN16072742	Chersky.3_6	Rhodoferax sp.
GCA_017881145.1	JADGRG000000000	SAMN16072738	Chersky_785	Sandaracinaceae bacterium
GCA_017881055.1	JADGRF000000000	SAMN16072737	Chersky_700	Sandaracinaceae bacterium
GCA_017882465.1	JADGPN000000000	SAMN16072693	Chersky.24_35	Solirubrobacteraceae bacterium
GCA_017882445.1	JADGPK000000000	SAMN16072690	Chersky.15_14	Solirubrobacteraceae bacterium
GCA_017882455.1	JADGPL000000000	SAMN16072691	Chersky.17_7	Solirubrobacteraceae bacterium
GCA_017882425.1	JADGPM000000000	SAMN16072692	Chersky_296	Solirubrobacteraceae bacterium
GCA_017882405.1	JADGPO000000000	SAMN16072694	Chersky_338	Solirubrobacteraceae bacterium
GCA_017882375.1	JADGPP000000000	SAMN16072695	Chersky.18_22	Solirubrobacteraceae bacterium
GCA_017882505.1	JADGPJ000000000	SAMN16072689	Chersky.31_16	Solirubrobacterales bacterium
GCA_017882645.1	JADGPC000000000	SAMN16072682	Chersky_822	Streptosporangiales bacterium
GCA_017881795.1	JADGQM000000000	SAMN16072718	Chersky.40_12	Syntrophobacteraceae bacterium
GCA_017881785.1	JADGQL000000000	SAMN16072717	Chersky.35_50	Syntrophobacterales bacterium
GCA_017881765.1	JADGQN000000000	SAMN16072719	Chersky.21_67	Syntrophobacterales bacterium
GCA_017883405.1	JADGNO000000000	SAMN16072642	Chersky_484	Terracidiphilus sp.
GCA_017883265.1	JADGNX000000000	SAMN16072651	Chersky.13_21	Thermoanaerobaculia bacterium
GCA_017883235.1	JADGNY000000000	SAMN16072652	Chersky.31_28	Thermoanaerobaculia bacterium
GCA_017883215.1	JADGOA000000000	SAMN16072654	Chersky.15_12	Thermoanaerobaculia bacterium
GCA_017883205.1	JADGNZ000000000	SAMN16072653	Chersky.9_17	Thermoanaerobaculia bacterium
GCA_017882055.1	JADGQE000000000	SAMN16072710	Chersky.3_67	Thermoflexales bacterium
GCA_017882615.1	JADGPD000000000	SAMN16072683	Chersky.2_42	Thermoleophilia bacterium
GCA_017882605.1	JADGPE000000000	SAMN16072684	Chersky.18_23	Thermoleophilia bacterium
GCA_017882585.1	JADGPF000000000	SAMN16072685	Chersky_126	Thermoleophilia bacterium
GCA_017882555.1	JADGPH000000000	SAMN16072687	Chersky_814	Thermoleophilia bacterium
GCA_017882545.1	JADGPG000000000	SAMN16072686	Chersky_388	Thermoleophilia bacterium
GCA_017882525.1	JADGPI000000000	SAMN16072688	Chersky_299	Thermoleophilia bacterium
GCA_017882325.1	JADGPQ000000000	SAMN16072696	Chersky.21_4	Thermoleophilia bacterium
GCA_017880715.1	JADGRT000000000	SAMN16072751	Chersky.3_63	Verrucomicrobiia bacterium
GCA_017883525.1	JADGNJ000000000	SAMN16072637	Chersky.15_44	archaeon
GCA_017881405.1	JADGQY000000000	SAMN16072730	Chersky.9_15	bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	445
Data volume, Tbytes	0.20

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permafrost metagenome

Chersky soil metagenome

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