Populus trichocarpa (ID 1153601) - BioProject

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Accession: PRJNA1153601 ID: 1153601

Populus trichocarpa

Populus trichocarpa Expression Quantitative Trait Nucleotides (eQTN) data

Data generated for Elucidating transcriptional regulation using Expression Quantitative Trait Nucleotides (eQTN) mapping in Populus trichocarpa

Accession	PRJNA1153601
Type	Umbrella project
Submission	Registration date: 28-Aug-2024 DOE Joint Genome Institute
Related Resources	GOLD Study JGI Award DOI

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	1721
Other datasets
BioSample	1721

SRA Data Details

Parameter	Value
Data volume, Gbases	8,391
Data volume, Tbytes	3.86

Populus trichocarpa encompasses the following 1721 sub-projects:

Project Type

Number of Projects

metagenome

BioProject accession	Organism	Title
PRJNA341737	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_72 h_r1_c metatranscriptome (DOE Joint Genome Institute)
PRJNA341734	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_24 h_r1_b metatranscriptome (DOE Joint Genome Institute)
PRJNA341736	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_24 h_r3_b metatranscriptome (DOE Joint Genome Institute)
PRJNA341740	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_0 h_r1_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341742	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_0 h_r3_a metatranscriptome (DOE Joint Genome Institute)

List all 21 'metagenome' projects...

BioProject accession	Organism	Title
PRJNA341737	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_72 h_r1_c metatranscriptome (DOE Joint Genome Institute)
PRJNA341734	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_24 h_r1_b metatranscriptome (DOE Joint Genome Institute)
PRJNA341736	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_24 h_r3_b metatranscriptome (DOE Joint Genome Institute)
PRJNA341740	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_0 h_r1_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341742	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_0 h_r3_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341730	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_3 week_r2_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341743	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_24 h_r1_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341726	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_72 h_r1_b metatranscriptome (DOE Joint Genome Institute)
PRJNA341735	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_24 h_r2_c metatranscriptome (DOE Joint Genome Institute)
PRJNA341728	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_72 h_r3_c metatranscriptome (DOE Joint Genome Institute)
PRJNA341731	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_3 week_r3_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341733	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_0 h_r3_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341727	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_72 h_r2_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341711	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Clatskanie, Oregon, USA - Besc22_0 h_r1_b Metatranscriptome (DOE Joint Genome Institute)
PRJNA341729	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_3 week_r1_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341724	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_24 h_r2_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341738	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_72 h_r2_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341739	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_72 h_r3_c metatranscriptome (DOE Joint Genome Institute)
PRJNA341725	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_24 h_r3_b metatranscriptome (DOE Joint Genome Institute)
PRJNA341741	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_0 h_r2_a metatranscriptome (DOE Joint Genome Institute)
PRJNA341732	plant metagenome	Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_0 h_r2_a metatranscriptome (DOE Joint Genome Institute)

Less...

transcriptome

1700

BioProject accession	Organism	Title
PRJNA472675	Populus trichocarpa	Populus trichocarpa BESC-805_25_17_LEAF eQTN mapping transcriptome (DOE Joint Genome Institute)
PRJNA452741	Populus trichocarpa	Populus trichocarpa GW-9863_25_31_LEAF transcriptome (DOE Joint Genome Institute)
PRJNA452598	Populus trichocarpa	Populus trichocarpa BESC-21_23_14_LEAF transcriptome (DOE Joint Genome Institute)
PRJNA452696	Populus trichocarpa	Populus trichocarpa BESC-375_24_9_LEAF transcriptome (DOE Joint Genome Institute)
PRJNA452763	Populus trichocarpa	Populus trichocarpa GW-9759_24_31_LEAF transcriptome (DOE Joint Genome Institute)

List all 1700 'transcriptome' projects...

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Populus trichocarpa

Populus trichocarpa Expression Quantitative Trait Nucleotides (eQTN) data

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