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Accession: PRJNA235618 ID: 235618

TB-ARC - KRITH 2

See Genome Information for Mycobacterium tuberculosis
NIAID-funded study of Mycobacterium tuberculosis, analyzing over 200 strains from two patient cohorts from the province of KwaZulu-Natal (KZN) in South Africa. The overarching goal for this work is to obtain full genome sequence data from well characterized drug-resistant, MDR-TB, XDR-TB (extensively drug resistant TB), and TDR-TB (totally drug resistant TB) strains to understand the genomic patterns of drug resistance.
AccessionPRJNA235618
TypeUmbrella Comparative genomics project (Subtype:Comparative genomics)
OrganismMycobacterium tuberculosis[Taxonomy ID: 1773]
Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis
SubmissionRegistration date: 17-Jan-2014
Broad Institute
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)14273
WGS master182
SRA Experiments513
Protein Sequences728185
Other datasets
BioSample220
Assembly182
SRA Data Details
ParameterValue
Data volume, Gbases270
Data volume, Tbytes0.14
This project encompasses the following 221 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds
Contigs
SRA or Trace
Total

168
14
39
221
BioProject
accession		Assembly
level		OrganismTitle
PRJNA235615 SRA or TraceMycobacterium tuberculosisTB-ARC - KRITH 2 (Broad Institute)
PRJNA235563 SRA or TraceMycobacterium tuberculosis TKK_01_0095TB-ARC - KRITH 2 (Broad Institute)
PRJNA235562 SRA or TraceMycobacterium tuberculosis TKK_02_0051_2TB-ARC - KRITH 2 (Broad Institute)
PRJNA235395 ScaffoldsMycobacterium tuberculosis TKK_03_0012TB-ARC - KRITH 2 (Broad Institute)
PRJNA235396 SRA or TraceMycobacterium tuberculosis TKK_03_0014TB-ARC - KRITH 2 (Broad Institute)
List all 221 'Genome sequencing' projects...

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