ID 219826 - BioProject

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Accession: PRJNA219826 ID: 219826

TB-ARC - CDRC Alland

See Genome Information for Mycobacterium tuberculosis

The NIH-funded Tuberculosis Clinical Diagnostics Research Consortium (TB-CDRC)provided approximately 200 clinical M. tuberculosis strains, with a wide variety of drug resistance patterns from Uganda and South Korea for whole genome sequencing and comparison. The sequenced strains have also been deposited into BEI Resources for use by the scientific community. This project is highly relevant to the understanding of the biology of M. tuberculosis and to development of new diagnostic and therapeutic approaches.

Accession	PRJNA219826
Type	Umbrella project
Organism	Mycobacterium tuberculosis[Taxonomy ID: 1773] Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis
Submission	Registration date: 20-Sep-2013 Broad Institute
Related Resources	TB-ARC CDRC at Broad Institute
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	10691
WGS master	166
SRA Experiments	484
Protein Sequences	663022
Other datasets
BioSample	212
Assembly	166

SRA Data Details

Parameter	Value
Data volume, Gbases	382
Data volume, Tbytes	0.20

This project encompasses the following 213 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Scaffolds
Contigs
SRA or Trace
No data links
Total

154
12
40
7
213

BioProject accession	Assembly level	Organism	Title
PRJNA219825	No data links	Mycobacterium tuberculosis	TB-ARC - CDRC Alland (Broad Institute)
PRJNA219753	Scaffolds	Mycobacterium tuberculosis KT-0001	TB-ARC - CDRC Alland (Broad Institute)
PRJNA219754	Scaffolds	Mycobacterium tuberculosis KT-0002	TB-ARC - CDRC Alland (Broad Institute)
PRJNA219755	Scaffolds	Mycobacterium tuberculosis KT-0003	TB-ARC - CDRC Alland (Broad Institute)
PRJNA226758	Scaffolds	Mycobacterium tuberculosis KT-0004	TB-ARC - CDRC Alland (Broad Institute)

List all 213 'Genome sequencing' projects...

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TB-ARC - CDRC Alland

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