Anolis carolinensis is an important model for studying squamate evolution and was the first non-avian reptile genome sequenced. We provide an improved assembly for Anolis carolinensis constructed using PacBio HiFi long-reads, optical maps, and HiC.
| Accession | PRJNA1032486 |
| Type | Umbrella project |
| Grants | - "Dimensions US-South Africa: Convergent evolution across time and space: Evolutionary diversity and contemporary adaptation in New and Old World lizards" (Grant ID DEB-1927156, National Science Foundation)
- "Collaborative Research: Enhancers and the Convergent Evolution of Limb Deduction in Squamates" (Grant ID IOS-1754417, National Science Foundation)
- "Collaborative Research: Enhancers and the Convergent Evolution of Limb Deduction in Squamates" (Grant ID IOS-1754950, National Science Foundation)
- "Collaborative Research: Enhancers and the Convergent Evolution of Limb Deduction in Squamates" (Grant ID IOS-1755178, National Science Foundation)
|
| Submission | Registration date: 26-Oct-2023
Louisiana State University |
| Relevance | Evolution |
| Locus Tag Prefix | R5X59 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 56210 |
| WGS master | 1 |
| Transcript | 55981 |
| Protein Sequences | 47443 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Anolis carolinensis encompasses the following 2 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes |
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA1032920 | Chromosomes | Anolis carolinensis | Anolis carolinensis (green anole) genome assembly, rAnoCar3.1.pri, primary assembly with sex chromosomes (Louisiana State University) | | PRJNA1071582 | Chromosomes | Anolis carolinensis | Anolis carolinensis RefSeq Genome sequencing and assembly (NCBI) |
|