See
Genome Information for Capsicum annuum
Long-range short-read assembly of hybrid Capsicum annuum, cross between CM334 and blocky type to assess feasibility of genome assembly with new technologies for complex plant genomes.
| Accession | PRJNA376668 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Capsicum annuum[Taxonomy ID: 4072] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum; Capsicum annuum |
| Publications | - Hulse-Kemp AM et al., "Reference quality assembly of the 3.5-Gb genome of Capsicum annuum from a single linked-read library.", Hortic Res, 2018;5:4
- Jo YD et al., "Complete sequencing and comparative analyses of the pepper (Capsicum annuum L.) plastome revealed high frequency of tandem repeats and large insertion/deletions on pepper plastome.", Plant Cell Rep, 2011 Feb;30(2):217-29
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| Submission | Registration date: 19-Dec-2017
University of California, Davis |
| Relevance | Agricultural |
| Locus Tag Prefix | B2H82 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 13 |
| WGS master | 1 |
| SRA Experiments | 1 |
| Publications |
| PubMed | 2 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related RefSeq Project
PRJNA814299 : Capsicum annuum cultivar:UCD-10X-F1 RefSeq Genome sequencing