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Accession: PRJNA265547 ID: 265547

Setaria viridis cultivar:A10

Setaria viridis cultivar:A10 Genome sequencing and assembly

See Genome Information for Setaria viridis
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743 additional projects are related by organism.

Development of sequence-based community tools for Setaria viridis-a model genetic system for C4 grasses

AccessionPRJNA265547
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismSetaria viridis[Taxonomy ID: 4556]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria; Setaria viridis
PublicationsMamidi S et al., "A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci.", Nat Biotechnol, 2020 Oct;38(10):1203-1210
SubmissionRegistration date: 7-May-2019
DOE Joint Genome Institute
Related Resources
RelevanceComparative Analysis
Locus Tag PrefixSEVIR
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)49
WGS master1
SRA Experiments6
Protein Sequences50526
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_005286985.2ChromosomeSNSE00000000
9
SAMN05660902
Setaria viridis
SRA Data Details
ParameterValue
Data volume, Gbases185
Data volume, Tbytes0.12
Related RefSeq Project
PRJNA633601 : Setaria viridis cultivar:A10 RefSeq Transcriptome or Gene expression

Supplemental Content

Related information

Related Resources

LinkOut to external resources

  • GOLD: Gp0033098 [Genomes On Line Database]
    GOLD: Gp0033098
    Genomes On Line Database

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