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Accession: PRJNA186851 ID: 186851

Trichophyton SNP Identification

To identify SNPs from 14 strains that might elucidate differences in preference of host and population variability.
AccessionPRJNA186851
TypeUmbrella Comparative genomics project (Subtype:Comparative genomics)
OrganismTrichophyton[Taxonomy ID: 5550]
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton
SubmissionRegistration date: 18-Jan-2013
Broad Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)8243
WGS master12
SRA Experiments34
Protein Sequences123635
Other datasets
BioSample14
Assembly12
SRA Data Details
ParameterValue
Data volume, Gbases153
Data volume, Mbytes81953
This project encompasses the following 14 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds
Contigs
SRA or Trace
Total

10
2
2
14
BioProject
accession		Assembly
level		OrganismTitle
PRJNA186827 ScaffoldsTrichophyton interdigitale H6sequencing of Trichophyton (Broad Institute)
PRJNA186835 ContigsTrichophyton interdigitale MR816sequencing of Trichophyton (Broad Institute)
PRJNA186828 ScaffoldsTrichophyton rubrum CBS 100081sequencing of Trichophyton (Broad Institute)
PRJNA186834 SRA or TraceTrichophyton rubrum CBS 100084sequencing of Trichophyton (Broad Institute)
PRJNA186833 ScaffoldsTrichophyton rubrum CBS 202.88sequencing of Trichophyton (Broad Institute)
List all 14 'Genome sequencing' projects...

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