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Accession: PRJNA1034652 ID: 1034652

BioScales - Defining plant gene function and its connection to ecosystem nitrogen and carbon cycling

BioScales - Defining plant gene function and its connection to ecosystem nitrogen and carbon cycling Metagenome

The goal of this study is to understand how targeted genomic factors are involved in carbon and nitrogen cycling in the bioenergy relevant model species Populus, how they scale through root derived metabolites, to the soil microbiome, and thereby contribute to enhanced biogeochemical processes.
AccessionPRJNA1034652
TypeUmbrella project
SubmissionRegistration date: 1-Nov-2023
DOE Joint Genome Institute
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments411
Other datasets
BioSample415
SRA Data Details
ParameterValue
Data volume, Gbases9,437
Data volume, Tbytes2.99
BioScales - Defining plant gene function and its connection to ecosystem nitrogen and carbon cycling encompasses the following 415 sub-projects:
Project TypeNumber of Projects
metagenome318
BioProject
accession
OrganismTitle
PRJNA1016794rhizosphere metagenomeRhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere metagenome (DOE Joint Genome Institute)
PRJNA1016793rhizosphere metagenomeRhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere metagenome (DOE Joint Genome Institute)
PRJNA1016792rhizosphere metagenomeRhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere metagenome (DOE Joint Genome Institute)
PRJNA1016790rhizosphere metagenomeRhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere metagenome (DOE Joint Genome Institute)
PRJNA1016789rhizosphere metagenomeRhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere metagenome (DOE Joint Genome Institute)
List all 318 'metagenome' projects...
transcriptome97
BioProject
accession
OrganismTitle
PRJNA1016500Populus trichocarpaPopulus trichocarpa BESC-866-Co1_10_5 transcriptome (DOE Joint Genome Institute)
PRJNA1016505Populus trichocarpaPopulus trichocarpa BESC-904-Co2_51_17 transcriptome (DOE Joint Genome Institute)
PRJNA1016511Populus trichocarpaPopulus trichocarpa GW-4579-CL1_25_23 transcriptome (DOE Joint Genome Institute)
PRJNA1016516Populus trichocarpaPopulus trichocarpa GW-7986-Co2_68_28 transcriptome (DOE Joint Genome Institute)
PRJNA1016517Populus trichocarpaPopulus trichocarpa GW-7986-Co3_31_39 transcriptome (DOE Joint Genome Institute)
List all 97 'transcriptome' projects...

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