This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA1011311; GEO: GSE242090 |
| Type | Umbrella project |
| Publications | Lobón-Iglesias MJ et al., "Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups.", Nat Commun, 2023 Oct 20;14(1):6669 |
| Submission | Registration date: 31-Aug-2023
U900, Centre de Recherche, Institut Curie |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 45 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 45 |
| GEO DataSets | 7 |
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups encompasses the following 6 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA1011315 | Homo sapiens | Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [DNAmeth_EPICarray] (U900, Centre de Recherche,...) |
|
| Transcriptome or Gene expression | 5 |
BioProject
accession | Organism | Title |
|---|
| PRJNA1009421 | Homo sapiens | Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [bulkRNAseq_ATRT_cellLines] (U900, Centre de Recherche,...) | | PRJNA1010202 | Homo sapiens | Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [bulkRNAseq_primaryATRT] (U900, Centre de Recherche,...) | | PRJNA1009432 | Homo sapiens | Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [scRNAseq_ATRT_CAL] (U900, Centre de Recherche,...) | | PRJNA1009433 | Mus musculus | Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [scRNAseq_mouseRT_R26SHH] (U900, Centre de Recherche,...) | | PRJNA1009427 | Mus musculus | Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [bulkRNAseq_mouseRT_R26] (U900, Centre de Recherche,...) |
|