bioreactor metagenome (ID 629336) - BioProject

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Accession: PRJNA629336 ID: 629336

bioreactor metagenome

Thiocyanate and organic carbon inputs drive convergent selection for specific autotrophic Afipia and Thiobacillus strains within complex microbiomes

Thiocyanate (SCN) contamination threatens aquatic ecosystems and pollutes vital fresh water supplies. More...

Accession	PRJNA629336
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	bioreactor metagenome[Taxonomy ID: 1076179] unclassified sequences; metagenomes; ecological metagenomes; bioreactor metagenome
Submission	Registration date: 8-Mar-2021 Jill Banfield Lab (University of California Berkeley)
Relevance	Industrial

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	232
SRA Experiments	55
Other datasets
BioSample	287
Assembly	232

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

155
77
232

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_017307795.1	JAFKGH000000000	SAMN18061346	SCN18_14_9_16_R1_B_66_13	Accumulibacter sp.
GCA_017307435.1	JAFKED000000000	SAMN18061290	SCN18_13_7_16_R4_B_68_29	Achromobacter sp.
GCA_017307505.1	JAFKEE000000000	SAMN18061291	SCN18_31_3_15_R4_B_62_15	Acidobacteriota bacterium
GCA_017307415.1	JAFKEG000000000	SAMN18061293	SCN18_30_10_14_R3_B_65_125	Acidovorax sp.
GCA_017308515.1	JAFKEN000000000	SAMN18061300	SCN18_30_10_14_R1_B_73_20	Actinomycetales bacterium
GCA_017308525.1	JAFKEM000000000	SAMN18061299	SCN18_30_10_14_R2_B_70_8	Actinomycetota bacterium
GCA_017308715.1	JAFKEJ000000000	SAMN18061296	SCN18_13_7_16_R2_B_71_7	Actinomycetota bacterium
GCA_017308675.1	JAFKEK000000000	SAMN18061297	SCN18_13_7_16_R3_B_70_9	Actinomycetota bacterium
GCA_017308655.1	JAFKEL000000000	SAMN18061298	SCN18_14_9_16_R4_B_68_6	Actinomycetota bacterium
GCA_017307455.1	JAFKEH000000000	SAMN18061294	SCN18_13_7_16_R1_B_69_21	Actinomycetota bacterium
GCA_017307595.1	JAFKEI000000000	SAMN18061295	SCN18_25_8_15_R3_B_67_7	Actinomycetota bacterium
GCA_017308545.1	JAFKEO000000000	SAMN18061301	SCN18_25_1_16_R4_B_61_46	Afipia felis
GCA_017308495.1	JAFKES000000000	SAMN18061305	SCN18_30_10_14_R2_B_65_16_A	Afipia sp.
GCA_017308625.1	JAFKEP000000000	SAMN18061302	SCN18_10_11_15_R3_B_64_1796	Afipia sp.
GCA_017308595.1	JAFKER000000000	SAMN18061304	SCN18_30_10_14_R1_B_60_16	Afipia sp.
GCA_017308575.1	JAFKEQ000000000	SAMN18061303	SCN18_30_10_14_R3_P_62_188	Afipia sp.
GCA_017305495.1	JAFKKX000000000	SAMN18061466	SCN18_30_10_14_R3_B_60_7	Agrobacterium pusense
GCA_017308615.1	JAFKET000000000	SAMN18061306	SCN18_25_8_15_R2_B_69_21	Alicycliphilus denitrificans
GCA_017308475.1	JAFKEU000000000	SAMN18061307	SCN18_30_10_14_R2_B_65_16_B	Alphaproteobacteria bacterium
GCA_017308415.1	JAFKEZ000000000	SAMN18061312	SCN18_31_3_15_R4_B_62_12	Alphaproteobacteria bacterium
GCA_017308425.1	JAFKEY000000000	SAMN18061311	SCN18_14_9_16_R3_B_62_9	Alphaproteobacteria bacterium
GCA_017308405.1	JAFKEV000000000	SAMN18061308	SCN18_30_10_14_R4_B_62_8	Alphaproteobacteria bacterium
GCA_017308395.1	JAFKEX000000000	SAMN18061310	SCN18_25_8_15_R4_B_62_10	Alphaproteobacteria bacterium
GCA_017308375.1	JAFKEW000000000	SAMN18061309	SCN18_26_2_15_R1_B_62_24	Alphaproteobacteria bacterium
GCA_017308345.1	JAFKFE000000000	SAMN18061317	SCN18_30_10_14_R4_P_64_8	Alphaproteobacteria bacterium
GCA_017308305.1	JAFKFD000000000	SAMN18061316	SCN18_10_11_15_R4_P_44_11	Alphaproteobacteria bacterium
GCA_017308295.1	JAFKFB000000000	SAMN18061314	SCN18_26_2_15_R5_B_66_27	Alphaproteobacteria bacterium
GCA_017308285.1	JAFKFC000000000	SAMN18061315	SCN18_10_11_15_R4_P_33_10	Alphaproteobacteria bacterium
GCA_017308275.1	JAFKFA000000000	SAMN18061313	SCN18_13_7_16_R1_B_62_16	Alphaproteobacteria bacterium
GCA_017308235.1	JAFKFL000000000	SAMN18061324	SCN18_14_9_16_R2_B_64_15	Alphaproteobacteria bacterium
GCA_017308135.1	JAFKFM000000000	SAMN18061325	SCN18_30_10_14_R3_P_65_206	Alphaproteobacteria bacterium
GCA_017307375.1	JAFKFH000000000	SAMN18061320	SCN18_10_11_15_R5_P_68_131	Alphaproteobacteria bacterium
GCA_017307355.1	JAFKFG000000000	SAMN18061319	SCN18_30_10_14_R2_B_63_12	Alphaproteobacteria bacterium
GCA_017307335.1	JAFKFJ000000000	SAMN18061322	SCN18_25_1_16_R2_B_70_11	Alphaproteobacteria bacterium
GCA_017307315.1	JAFKFF000000000	SAMN18061318	SCN18_30_10_14_R2_B_64_8_B	Alphaproteobacteria bacterium
GCA_017307275.1	JAFKFK000000000	SAMN18061323	SCN18_30_10_14_R5_P_65_16	Alphaproteobacteria bacterium
GCA_017307285.1	JAFKFI000000000	SAMN18061321	SCN18_30_10_14_R2_B_67_12_A	Alphaproteobacteria bacterium
GCA_017308255.1	JAFKFN000000000	SAMN18061326	SCN18_25_8_15_R2_B_66_16_B	Altererythrobacter sp.
GCA_017308175.1	JAFKFO000000000	SAMN18061327	SCN18_30_10_14_R3_B_56_13	Armatimonadota bacterium
GCA_017308155.1	JAFKFR000000000	SAMN18061330	SCN18_10_11_15_R1_P_43_22	Bacteroidota bacterium
GCA_017308115.1	JAFKFS000000000	SAMN18061331	SCN18_25_8_15_R2_B_69_14	Bordetella sp.
GCA_017308075.1	JAFKFX000000000	SAMN18061336	SCN18_30_10_14_R3_P_67_61	Bosea sp. (in: a-proteobacteria)
GCA_017308045.1	JAFKFU000000000	SAMN18061333	SCN18_30_10_14_R3_B_67_17	Bosea sp. (in: a-proteobacteria)
GCA_017308035.1	JAFKFT000000000	SAMN18061332	SCN18_26_2_15_R1_F_67_33	Bosea sp. (in: a-proteobacteria)
GCA_017308015.1	JAFKFW000000000	SAMN18061335	SCN18_25_8_15_R2_B_66_16_A	Bosea sp. (in: a-proteobacteria)
GCA_017307945.1	JAFKFY000000000	SAMN18061337	SCN18_13_7_16_R5_B_67_8	Bosea sp. (in: a-proteobacteria)
GCA_017307955.1	JAFKFV000000000	SAMN18061334	SCN18_30_10_14_R1_P_68_18	Bosea sp. (in: a-proteobacteria)
GCA_017308095.1	JAFKFZ000000000	SAMN18061338	SCN18_25_1_16_R5_B_67_14	Bosea sp. (in: a-proteobacteria)
GCA_017307935.1	JAFKGA000000000	SAMN18061339	SCN18_14_9_16_R4_B_67_46	Brevundimonas sp.
GCA_017307915.1	JAFKGG000000000	SAMN18061345	SCN18_13_7_16_R4_B_66_10	Burkholderiales bacterium
GCA_017307875.1	JAFKGC000000000	SAMN18061341	SCN18_25_1_16_R1_B_70_17	Burkholderiales bacterium
GCA_017307865.1	JAFKGE000000000	SAMN18061343	SCN18_13_7_16_R1_B_69_20	Burkholderiales bacterium
GCA_017307855.1	JAFKGD000000000	SAMN18061342	SCN18_30_10_14_R3_P_68_190	Burkholderiales bacterium
GCA_017307835.1	JAFKGF000000000	SAMN18061344	SCN18_25_1_16_R1_B_68_8	Burkholderiales bacterium
GCA_017307975.1	JAFKGB000000000	SAMN18061340	SCN18_10_11_15_R1_B_67_30	Burkholderiales bacterium
GCA_017307255.1	JAFKGJ000000000	SAMN18061348	SCN18_14_9_16_R1_B_59_45	Candidatus Kapaibacterium thiocyanatum
GCA_017307165.1	JAFKGK000000000	SAMN18061349	SCN18_26_2_15_R4_P_51_74	Candidatus Melainabacteria bacterium
GCA_017307065.1	JAFKGL000000000	SAMN18061350	SCN18_10_11_15_R4_P_38_20	Candidatus Paracaedimonas acanthamoebae
GCA_017307155.1	JAFKGM000000000	SAMN18061351	SCN18_26_2_15_R3_B_47_55	Candidatus Saccharibacteria bacterium
GCA_017307205.1	JAFKGN000000000	SAMN18061352	SCN18_30_10_14_R3_P_69_10	Caulobacterales bacterium
GCA_017307135.1	JAFKGO000000000	SAMN18061353	SCN18_25_1_16_R2_B_73_7	Cellulomonas sp.
GCA_017307765.1	JAFKGP000000000	SAMN18061354	SCN18_25_1_16_R2_B_73_8	Cellulomonas sp.
GCA_017307755.1	JAFKGQ000000000	SAMN18061355	SCN18_31_3_15_R5_B_50_32	Chitinophagaceae bacterium
GCA_017307735.1	JAFKGR000000000	SAMN18061356	SCN18_25_1_16_R1_B_40_177	Chitinophagaceae bacterium
GCA_017307655.1	JAFKGS000000000	SAMN18061357	SCN18_25_1_16_R1_B_38_15	Chlamydiales bacterium
GCA_017307685.1	JAFKGT000000000	SAMN18061358	SCN18_26_2_15_R1_F_54_23	Chloroflexota bacterium
GCA_017307665.1	JAFKGV000000000	SAMN18061360	SCN18_14_9_16_R1_B_40_24	Chryseobacterium sp.
GCA_017306935.1	JAFKGU000000000	SAMN18061359	SCN18_26_2_15_R4_B_37_6	Chryseobacterium sp.
GCA_017307605.1	JAFKGW000000000	SAMN18061361	SCN18_14_9_16_R4_B_68_12	Comamonadaceae bacterium
GCA_017307555.1	JAFKGX000000000	SAMN18061362	SCN18_14_9_16_R5_B_68_17	Comamonadaceae bacterium
GCA_017306895.1	JAFKGY000000000	SAMN18061363	SCN18_25_1_16_R1_B_67_66	Comamonas sp.
GCA_017307705.1	JAFKGZ000000000	SAMN18061364	SCN18_30_10_14_R3_B_67_7	Delftia acidovorans
GCA_017307635.1	JAFKHB000000000	SAMN18061366	SCN18_30_10_14_R3_P_66_9	Devosia sp.
GCA_017307565.1	JAFKHD000000000	SAMN18061368	SCN18_25_8_15_R2_B_62_9	Devosia sp.
GCA_017307535.1	JAFKHA000000000	SAMN18061365	SCN18_30_10_14_R3_B_66_58	Devosia sp.
GCA_017307495.1	JAFKHE000000000	SAMN18061369	SCN18_30_10_14_R3_P_66_71	Devosia sp.
GCA_017307475.1	JAFKHC000000000	SAMN18061367	SCN18_26_2_15_R2_B_67_34	Devosia sp.
GCA_017306945.1	JAFKHF000000000	SAMN18061370	SCN18_25_8_15_R2_B_67_10	Devosia sp.
GCA_017306915.1	JAFKHG000000000	SAMN18061371	SCN18_14_9_16_R4_B_38_12	Dysgonomonas mossii
GCA_017306865.1	JAFKHH000000000	SAMN18061372	SCN18_14_9_16_R5_B_42_18	Filimonas sp.
GCA_017306855.1	JAFKHI000000000	SAMN18061373	SCN18_13_7_16_R1_B_40_10	Flavobacteriia bacterium
GCA_017306835.1	JAFKHJ000000000	SAMN18061374	SCN18_31_3_15_R4_B_40_63	Flavobacterium sp.
GCA_017306795.1	JAFKHK000000000	SAMN18061375	SCN18_25_1_16_R3_B_39_37	Gammaproteobacteria bacterium
GCA_017307195.1	JAFKHL000000000	SAMN18061376	SCN18_30_10_14_R2_P_63_16	Herbaspirillum huttiense
GCA_017307085.1	JAFKHM000000000	SAMN18061377	SCN18_10_11_15_R5_P_38_48	Holosporales bacterium
GCA_017307075.1	JAFKHN000000000	SAMN18061378	SCN18_30_10_14_R5_P_70_78	Hydrogenophaga sp.
GCA_017305455.1	JAFKKO000000000	SAMN18061457	SCN18_30_10_14_R3_B_63_20	Hyphomicrobiales bacterium
GCA_017305255.1	JAFKJS000000000	SAMN18061435	SCN18_30_10_14_R4_P_66_13	Hyphomicrobiales bacterium
GCA_017305885.1	JAFKJX000000000	SAMN18061440	SCN18_30_10_14_R2_B_63_8	Hyphomicrobiales bacterium
GCA_017305875.1	JAFKJV000000000	SAMN18061438	SCN18_14_9_16_R1_B_65_9	Hyphomicrobiales bacterium
GCA_017305845.1	JAFKKD000000000	SAMN18061446	SCN18_30_10_14_R3_B_69_7	Hyphomicrobiales bacterium
GCA_017305835.1	JAFKJY000000000	SAMN18061441	SCN18_10_11_15_R4_B_69_13	Hyphomicrobiales bacterium
GCA_017305815.1	JAFKJZ000000000	SAMN18061442	SCN18_30_10_14_R2_B_67_9	Hyphomicrobiales bacterium
GCA_017305785.1	JAFKKA000000000	SAMN18061443	SCN18_26_2_15_R2_B_67_7	Hyphomicrobiales bacterium
GCA_017305775.1	JAFKKB000000000	SAMN18061444	SCN18_26_2_15_R1_B_68_7	Hyphomicrobiales bacterium
GCA_017305755.1	JAFKKC000000000	SAMN18061445	SCN18_30_10_14_R4_P_67_37	Hyphomicrobiales bacterium
GCA_017305735.1	JAFKKE000000000	SAMN18061447	SCN18_30_10_14_R4_B_68_7_B	Hyphomicrobiales bacterium
GCA_017305715.1	JAFKKG000000000	SAMN18061449	SCN18_10_11_15_R3_B_63_59	Hyphomicrobiales bacterium
GCA_017305695.1	JAFKKJ000000000	SAMN18061452	SCN18_13_7_16_R1_B_63_8	Hyphomicrobiales bacterium
GCA_017305665.1	JAFKKH000000000	SAMN18061450	SCN18_25_1_16_R2_B_62_30	Hyphomicrobiales bacterium
GCA_017305655.1	JAFKKI000000000	SAMN18061451	SCN18_30_10_14_R3_B_63_8	Hyphomicrobiales bacterium
GCA_017305635.1	JAFKKF000000000	SAMN18061448	SCN18_31_3_15_R1_B_68_31	Hyphomicrobiales bacterium
GCA_017305935.1	JAFKJU000000000	SAMN18061437	SCN18_10_11_15_R1_B_63_17	Hyphomicrobiales bacterium
GCA_017305925.1	JAFKJW000000000	SAMN18061439	SCN18_26_2_15_R1_B_66_12	Hyphomicrobiales bacterium
GCA_017305595.1	JAFKKL000000000	SAMN18061454	SCN18_10_11_15_R1_B_63_12	Hyphomicrobiales bacterium
GCA_017305565.1	JAFKKK000000000	SAMN18061453	SCN18_30_10_14_R2_B_63_10	Hyphomicrobiales bacterium
GCA_017305555.1	JAFKKM000000000	SAMN18061455	SCN18_25_1_16_R1_B_62_13	Hyphomicrobiales bacterium
GCA_017305535.1	JAFKKN000000000	SAMN18061456	SCN18_13_7_16_R3_B_63_31	Hyphomicrobiales bacterium
GCA_017305515.1	JAFKKP000000000	SAMN18061458	SCN18_14_9_16_R3_B_60_10	Hyphomicrobiales bacterium
GCA_017304275.1	JAFKKW000000000	SAMN18061465	SCN18_30_10_14_R3_P_65_8	Hyphomicrobiales bacterium
GCA_017304225.1	JAFKJR000000000	SAMN18061434	SCN18_26_2_15_R1_F_64_27	Hyphomicrobiales bacterium
GCA_017304435.1	JAFKKR000000000	SAMN18061460	SCN18_30_10_14_R2_B_64_7	Hyphomicrobiales bacterium
GCA_017304355.1	JAFKKT000000000	SAMN18061462	SCN18_30_10_14_R2_B_67_7	Hyphomicrobiales bacterium
GCA_017305015.1	JAFKJO000000000	SAMN18061431	SCN18_26_2_15_R1_B_64_17	Hyphomicrobiales bacterium
GCA_017304935.1	JAFKJQ000000000	SAMN18061433	SCN18_30_10_14_R2_B_62_135	Hyphomicrobiales bacterium
GCA_017304885.1	JAFKJP000000000	SAMN18061432	SCN18_14_9_16_R2_B_63_13	Hyphomicrobiales bacterium
GCA_017304795.1	JAFKJT000000000	SAMN18061436	SCN18_30_10_14_R1_P_62_27	Hyphomicrobiales bacterium
GCA_017304575.1	JAFKKU000000000	SAMN18061463	SCN18_10_11_15_R4_P_68_13	Hyphomicrobiales bacterium
GCA_017304555.1	JAFKKS000000000	SAMN18061461	SCN18_30_10_14_R2_B_64_10	Hyphomicrobiales bacterium
GCA_017304505.1	JAFKKQ000000000	SAMN18061459	SCN18_30_10_14_R2_B_64_8_C	Hyphomicrobiales bacterium
GCA_017304475.1	JAFKKV000000000	SAMN18061464	SCN18_10_11_15_R5_B_67_21	Hyphomicrobiales bacterium
GCA_017304115.1	JAFKHO000000000	SAMN18061379	SCN18_30_10_14_R2_B_61_9	Hyphomicrobium denitrificans
GCA_017305615.1	JAFKHP000000000	SAMN18061380	SCN18_30_10_14_R1_P_61_7	Hyphomicrobium denitrificans
GCA_017307215.1	JAFKHQ000000000	SAMN18061381	SCN18_30_10_14_R3_B_61_7	Hyphomicrobium denitrificans
GCA_017306765.1	JAFKHS000000000	SAMN18061383	SCN18_10_11_15_R1_B_65_8	Hyphomicrobium sp.
GCA_017306745.1	JAFKHT000000000	SAMN18061384	SCN18_30_10_14_R3_B_64_9	Hyphomicrobium sp.
GCA_017306735.1	JAFKHU000000000	SAMN18061385	SCN18_10_11_15_R2_B_65_9	Hyphomicrobium sp.
GCA_017306805.1	JAFKHR000000000	SAMN18061382	SCN18_26_2_15_R2_B_61_8	Hyphomicrobium sp.
GCA_017306715.1	JAFKHV000000000	SAMN18061386	SCN18_10_11_15_R5_P_41_27	Legionella sp.
GCA_017306685.1	JAFKHW000000000	SAMN18061387	SCN18_25_1_16_R3_B_39_16	Legionella steelei
GCA_017306655.1	JAFKHX000000000	SAMN18061388	SCN18_30_10_14_R3_B_70_93	Leifsonia sp.
GCA_017305075.1	JAFKMW000000000	SAMN18061517	SCN18_26_2_15_R3_B_69_23	Lysobacteraceae bacterium
GCA_017305055.1	JAFKMZ000000000	SAMN18061520	SCN18_25_8_15_R2_B_66_12	Lysobacterales bacterium
GCA_017305175.1	JAFKMX000000000	SAMN18061518	SCN18_25_8_15_R5_B_66_24	Lysobacterales bacterium
GCA_017305135.1	JAFKNA000000000	SAMN18061521	SCN18_13_7_16_R1_B_69_60	Lysobacterales bacterium
GCA_017305095.1	JAFKMY000000000	SAMN18061519	SCN18_25_8_15_R4_B_70_612	Lysobacterales bacterium
GCA_017306625.1	JAFKIA000000000	SAMN18061391	SCN18_30_10_14_R5_P_61_9	Mesorhizobium sp.
GCA_017306615.1	JAFKHY000000000	SAMN18061389	SCN18_26_2_15_R1_P_65_22	Mesorhizobium sp.
GCA_017306585.1	JAFKIC000000000	SAMN18061393	SCN18_10_11_15_R5_B_64_12	Mesorhizobium sp.
GCA_017306575.1	JAFKIB000000000	SAMN18061392	SCN18_14_9_16_R5_B_63_39	Mesorhizobium sp.
GCA_017306545.1	JAFKID000000000	SAMN18061394	SCN18_13_7_16_R1_B_65_18	Mesorhizobium sp.
GCA_017306675.1	JAFKHZ000000000	SAMN18061390	SCN18_10_11_15_R1_B_65_7	Mesorhizobium sp.
GCA_017306535.1	JAFKIE000000000	SAMN18061395	SCN18_30_10_14_R5_P_69_51	Methylibium petroleiphilum
GCA_017306495.1	JAFKIF000000000	SAMN18061396	SCN18_25_8_15_R2_B_70_9	Microbacterium chocolatum
GCA_017306455.1	JAFKIH000000000	SAMN18061398	SCN18_10_11_15_R2_B_70_295	Microbacterium ginsengisoli
GCA_017306515.1	JAFKIG000000000	SAMN18061397	SCN18_26_2_15_R4_P_70_222	Microbacterium ginsengisoli
GCA_017306435.1	JAFKIJ000000000	SAMN18061400	SCN18_30_10_14_R3_P_70_19	Microbacterium sp.
GCA_017306415.1	JAFKIL000000000	SAMN18061402	SCN18_30_10_14_R4_P_70_55	Microbacterium sp.
GCA_017306375.1	JAFKIT000000000	SAMN18061410	SCN18_10_11_15_R1_B_70_9	Microbacterium sp.
GCA_017306385.1	JAFKIK000000000	SAMN18061401	SCN18_14_9_16_R1_B_69_54	Microbacterium sp.
GCA_017306355.1	JAFKIU000000000	SAMN18061411	SCN18_14_9_16_R2_B_71_11	Microbacterium sp.
GCA_017306335.1	JAFKIS000000000	SAMN18061409	SCN18_25_8_15_R4_B_70_7	Microbacterium sp.
GCA_017306305.1	JAFKIW000000000	SAMN18061413	SCN18_10_11_15_R1_P_71_863	Microbacterium sp.
GCA_017306295.1	JAFKIV000000000	SAMN18061412	SCN18_26_2_15_R5_F_70_48	Microbacterium sp.
GCA_017306475.1	JAFKII000000000	SAMN18061399	SCN18_10_11_15_R2_B_71_14	Microbacterium sp.
GCA_017305215.1	JAFKIN000000000	SAMN18061404	SCN18_25_8_15_R1_B_70_8	Microbacterium sp.
GCA_017305335.1	JAFKIM000000000	SAMN18061403	SCN18_10_11_15_R4_B_70_7	Microbacterium sp.
GCA_017305435.1	JAFKIP000000000	SAMN18061406	SCN18_30_10_14_R4_B_70_78	Microbacterium sp.
GCA_017305395.1	JAFKIR000000000	SAMN18061408	SCN18_25_1_16_R2_B_71_11	Microbacterium sp.
GCA_017305465.1	JAFKIQ000000000	SAMN18061407	SCN18_25_8_15_R2_B_70_11	Microbacterium sp.
GCA_017304395.1	JAFKIO000000000	SAMN18061405	SCN18_13_7_16_R2_B_70_8	Microbacterium sp.
GCA_017306275.1	JAFKIX000000000	SAMN18061414	SCN18_25_8_15_R2_B_72_69	Micrococcales bacterium
GCA_017306245.1	JAFKIY000000000	SAMN18061415	SCN18_25_1_16_R5_B_65_20	Micrococcales bacterium
GCA_017306215.1	JAFKIZ000000000	SAMN18061416	SCN18_14_9_16_R1_B_68_9	Myxococcales bacterium
GCA_017306235.1	JAFKJA000000000	SAMN18061417	SCN18_31_3_15_R1_B_62_136	Nitrobacter sp.
GCA_017306155.1	JAFKJB000000000	SAMN18061418	SCN18_25_8_15_R2_B_54_34	Nitrosospira multiformis
GCA_017306195.1	JAFKJC000000000	SAMN18061419	SCN18_25_1_16_R3_B_56_5	Nitrosospira sp.
GCA_017306115.1	JAFKJD000000000	SAMN18061420	SCN18_31_3_15_R1_B_56_42	Nitrosospira sp.
GCA_017306095.1	JAFKJE000000000	SAMN18061421	SCN18_30_10_14_R1_P_63_41	Novosphingobium sp.
GCA_017306175.1	JAFKJF000000000	SAMN18061422	SCN18_26_2_15_R1_B_64_47	Paenarthrobacter ureafaciens
GCA_017306075.1	JAFKJG000000000	SAMN18061423	SCN18_26_2_15_R4_B_65_12	Pandoraea pnomenusa
GCA_017306125.1	JAFKJH000000000	SAMN18061424	SCN18_30_10_14_R4_P_64_6	Pandoraea sp.
GCA_017306055.1	JAFKJI000000000	SAMN18061425	SCN18_25_1_16_R5_B_60_7	Phyllobacterium sp.
GCA_017306025.1	JAFKJJ000000000	SAMN18061426	SCN18_26_2_15_R2_P_68_10	Planctomycetota bacterium
GCA_017306015.1	JAFKJK000000000	SAMN18061427	SCN18_26_2_15_R1_B_70_19	Propionibacteriaceae bacterium
GCA_017305995.1	JAFKJM000000000	SAMN18061429	SCN18_30_10_14_R1_P_73_26	Pseudonocardia sp.
GCA_017305975.1	JAFKJL000000000	SAMN18061428	SCN18_26_2_15_R5_F_73_66	Pseudonocardia sp.
GCA_017305915.1	JAFKJN000000000	SAMN18061430	SCN18_10_11_15_R4_P_68_349	Reyranella sp.
GCA_017305405.1	JAFKKY000000000	SAMN18061467	SCN18_26_2_15_R2_B_60_31	Rhizobium tropici
GCA_017305365.1	JAFKLA000000000	SAMN18061469	SCN18_26_2_15_R2_P_68_51	Rhodanobacter sp.
GCA_017305355.1	JAFKKZ000000000	SAMN18061468	SCN18_26_2_15_R4_B_68_45	Rhodanobacter sp.
GCA_017305315.1	JAFKLB000000000	SAMN18061470	SCN18_26_2_15_R4_B_69_138	Rhodanobacter sp.
GCA_017305275.1	JAFKLF000000000	SAMN18061474	SCN18_30_10_14_R2_B_70_7	Rhodospirillales bacterium
GCA_017305285.1	JAFKLC000000000	SAMN18061471	SCN18_30_10_14_R4_P_70_11	Rhodospirillales bacterium
GCA_017304995.1	JAFKLE000000000	SAMN18061473	SCN18_14_9_16_R2_B_70_10	Rhodospirillales bacterium
GCA_017304975.1	JAFKLH000000000	SAMN18061476	SCN18_30_10_14_R4_B_68_7_A	Rhodospirillales bacterium
GCA_017304945.1	JAFKLG000000000	SAMN18061475	SCN18_26_2_15_R2_B_70_15	Rhodospirillales bacterium
GCA_017305035.1	JAFKLD000000000	SAMN18061472	SCN18_30_10_14_R2_P_68_7	Rhodospirillales bacterium
GCA_017304875.1	JAFKLI000000000	SAMN18061477	SCN18_25_1_16_R3_B_64_147	Rudaea sp.
GCA_017304895.1	JAFKLJ000000000	SAMN18061478	SCN18_25_8_15_R2_B_73_8	Salana multivorans
GCA_017305105.1	JAFKMV000000000	SAMN18061516	SCN18_10_11_15_R4_P_45_140	Sediminibacterium magnilacihabitans
GCA_017304845.1	JAFKLL000000000	SAMN18061480	SCN18_13_7_16_R1_B_68_13	Solirubrobacterales bacterium
GCA_017304835.1	JAFKLK000000000	SAMN18061479	SCN18_10_11_15_R1_B_67_19	Solirubrobacterales bacterium
GCA_017304815.1	JAFKLO000000000	SAMN18061483	SCN18_26_2_15_R1_F_50_26	Sphingobacteriales bacterium
GCA_017304765.1	JAFKLN000000000	SAMN18061482	SCN18_30_10_14_R5_P_47_50	Sphingobacteriales bacterium
GCA_017304755.1	JAFKLM000000000	SAMN18061481	SCN18_25_8_15_R2_B_44_42	Sphingobacteriales bacterium
GCA_017304735.1	JAFKLP000000000	SAMN18061484	SCN18_13_7_16_R1_B_44_11	Sphingobacteriales bacterium
GCA_017304715.1	JAFKLQ000000000	SAMN18061485	SCN18_26_2_15_R1_P_39_196	Sphingobacteriales bacterium
GCA_017304685.1	JAFKLR000000000	SAMN18061486	SCN18_10_11_15_R4_P_29_136	Sphingobacteriia bacterium
GCA_017304675.1	JAFKLS000000000	SAMN18061487	SCN18_14_9_16_R3_B_37_82	Sphingobacteriia bacterium
GCA_017304125.1	JAFKLV000000000	SAMN18061490	SCN18_14_9_16_R4_B_67_9	Sphingomonadales bacterium
GCA_017304105.1	JAFKLU000000000	SAMN18061489	SCN18_30_10_14_R1_B_66_9	Sphingomonadales bacterium
GCA_017309275.1	JAFKLT000000000	SAMN18061488	SCN18_30_10_14_R5_P_65_13	Sphingomonadales bacterium
GCA_017304195.1	JAFKLX000000000	SAMN18061492	SCN18_31_3_15_R3_B_68_146	Sphingomonas sp.
GCA_017304615.1	JAFKLZ000000000	SAMN18061494	SCN18_26_2_15_R5_F_65_27	Sphingomonas sp.
GCA_017304635.1	JAFKMA000000000	SAMN18061495	SCN18_30_10_14_R2_P_67_78	Sphingomonas sp.
GCA_017304655.1	JAFKLY000000000	SAMN18061493	SCN18_30_10_14_R1_P_65_26	Sphingomonas sp.
GCA_017305145.1	JAFKLW000000000	SAMN18061491	SCN18_30_10_14_R2_B_67_12_B	Sphingomonas sp.
GCA_017304595.1	JAFKMB000000000	SAMN18061496	SCN18_30_10_14_R2_B_65_10	Sphingopyxis terrae
GCA_017304495.1	JAFKMC000000000	SAMN18061497	SCN18_30_10_14_R1_P_49_46	Spirosoma sp.
GCA_017304455.1	JAFKMD000000000	SAMN18061498	SCN18_25_1_16_R1_B_69_12	Stenotrophomonas acidaminiphila
GCA_017304535.1	JAFKME000000000	SAMN18061499	SCN18_13_7_16_R1_B_68_91	Stenotrophomonas nitritireducens
GCA_017304365.1	JAFKMG000000000	SAMN18061501	SCN18_10_11_15_R1_P_69_7	Stenotrophomonas nitritireducens
GCA_017304415.1	JAFKMF000000000	SAMN18061500	SCN18_10_11_15_R1_B_69_70	Stenotrophomonas nitritireducens
GCA_017304315.1	JAFKMH000000000	SAMN18061502	SCN18_10_11_15_R1_B_69_67	Stenotrophomonas sp.
GCA_017307395.1	JAFKEF000000000	SAMN18061292	SCN18_25_8_15_R1_B_59_10	Terriglobales bacterium
GCA_017304335.1	JAFKMI000000000	SAMN18061503	SCN18_25_8_15_R2_B_48_20	Terrimonas ferruginea
GCA_017304255.1	JAFKMJ000000000	SAMN18061504	SCN18_25_8_15_R2_B_40_9	Terrimonas sp.
GCA_017309255.1	JAFKMN000000000	SAMN18061508	SCN18_10_11_15_R3_B_64_343	Thiobacillus sp.
GCA_017309235.1	JAFKMM000000000	SAMN18061507	SCN18_31_3_15_R5_B_63_816	Thiobacillus sp.
GCA_017309365.1	JAFKMO000000000	SAMN18061509	SCN18_14_9_16_R4_B_63_590	Thiobacillus sp.
GCA_017304205.1	JAFKML000000000	SAMN18061506	SCN18_26_2_15_R1_F_63_78	Thiobacillus sp.
GCA_017304295.1	JAFKMK000000000	SAMN18061505	SCN18_31_3_15_R5_B_63_15	Thiobacillus sp.
GCA_017304055.1	JAFKMP000000000	SAMN18061510	SCN18_30_10_14_R3_B_65_22	Thiobacillus sp.
GCA_017304035.1	JAFKMR000000000	SAMN18061512	SCN18_13_7_16_R3_B_64_19	Thiomonas arsenitoxydans
GCA_017304095.1	JAFKMQ000000000	SAMN18061511	SCN18_26_2_15_R5_F_64_14	Thiomonas arsenitoxydans
GCA_017305235.1	JAFKMT000000000	SAMN18061514	SCN18_30_10_14_R4_P_68_13	Variovorax sp.
GCA_017304015.1	JAFKMS000000000	SAMN18061513	SCN18_26_2_15_R2_B_67_25	Variovorax sp.
GCA_017305195.1	JAFKMU000000000	SAMN18061515	SCN18_30_10_14_R3_B_61_17	Verrucomicrobiota bacterium
GCA_017307785.1	JAFKGI000000000	SAMN18061347	SCN18_25_8_15_R3_B_62_28	Vulcanimicrobiota bacterium
GCA_017308215.1	JAFKFQ000000000	SAMN18061329	SCN18_30_10_14_R2_B_71_11	bacterium
GCA_017308185.1	JAFKFP000000000	SAMN18061328	SCN18_30_10_14_R2_B_64_8_A	bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	427
Data volume, Tbytes	0.20

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bioreactor metagenome

Thiocyanate and organic carbon inputs drive convergent selection for specific autotrophic Afipia and Thiobacillus strains within complex microbiomes

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