freshwater sediment metagenome (ID 525692) - BioProject

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Accession: PRJNA525692 ID: 525692

freshwater sediment metagenome

High-Arctic lake sediments are enriched in novel Metagenome Assembled Genomes fit for low temperature and oligotrophy

The Arctic is currently experiencing climate-change related warming, which rapidly affects the environmental constraints on its microbial communities. More...

Accession	PRJNA525692
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	freshwater sediment metagenome[Taxonomy ID: 556182] unclassified sequences; metagenomes; ecological metagenomes; freshwater sediment metagenome
Submission	Registration date: 15-Jan-2020 University of Ottawa
Relevance	Environmental
Locus Tag Prefix	QZU26

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	55
SRA Experiments	18
Other datasets
BioSample	61
Assembly	55

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

55
55

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_009885435.1	VFKR00000000	SAMN12036143	Bin_23_16	Acidobacteriota bacterium
GCA_009886115.1	VFJJ00000000	SAMN12036109	Bin_62_11	Actinomycetota bacterium
GCA_009886035.1	VFJN00000000	SAMN12036113	Bin_57_4	Actinomycetota bacterium
GCA_009885805.1	VFJZ00000000	SAMN12036125	Bin_62_12	Actinomycetota bacterium
GCA_009885745.1	VFKC00000000	SAMN12036128	Bin_68_4	Actinomycetota bacterium
GCA_009885945.1	VFJR00000000	SAMN12036117	Bin_61_36	Anaerolineaceae bacterium
GCA_009885445.1	VFKQ00000000	SAMN12036142	Bin_58_17	Anaerolineaceae bacterium
GCA_009885525.1	VFKN00000000	SAMN12036139	Bin_61_3	Anaerolineaceae bacterium
GCA_009885355.1	VFKW00000000	SAMN12036148	Bin_65_7	Candidatus Berkelbacteria bacterium
GCA_009885285.1	VFKX00000000	SAMN12036149	Bin_61_32	Candidatus Falkowbacteria bacterium
GCA_009885115.1	VFLH00000000	SAMN12036159	Bin_65_4	Candidatus Kerfeldbacteria bacterium
GCA_009885085.1	VFLK00000000	SAMN12036162	Bin_61_66	Candidatus Paceibacterota bacterium
GCA_009885205.1	VFLE00000000	SAMN12036156	Bin_12_23	Candidatus Shapirobacteria bacterium
GCA_009885535.1	VFKL00000000	SAMN12036137	Bin_61_1	Chitinophagaceae bacterium
GCA_009885605.1	VFKK00000000	SAMN12036136	Bin_64_3	Cyclobacteriaceae bacterium
GCA_009885395.1	VFKT00000000	SAMN12036145	Bin_38_12	Deltaproteobacteria bacterium
GCA_009885545.1	VFKM00000000	SAMN12036138	Bin_61_26	Flavobacteriales bacterium
GCA_009885195.1	VFLG00000000	SAMN12036158	Bin_58_16	Gallionellaceae bacterium
GCA_009885495.1	VFKP00000000	SAMN12036141	Bin_61_37	Gammaproteobacteria bacterium
GCA_009885315.1	VFLA00000000	SAMN12036152	Bin_76_8	Gammaproteobacteria bacterium
GCA_009885935.1	VFJT00000000	SAMN12036119	Bin_72_12	Gammaproteobacteria bacterium
GCA_009885665.1	VFKI00000000	SAMN12036134	Bin_66_13	Gammaproteobacteria bacterium
GCA_009885895.1	VFJV00000000	SAMN12036121	Bin_72_2	Gammaproteobacteria bacterium
GCA_009885845.1	VFJW00000000	SAMN12036122	Bin_37_3	Geobacter sp.
GCA_009886125.1	VFJK00000000	SAMN12036110	Bin_37_8	Geobacter sp.
GCA_009886055.1	VFJM00000000	SAMN12036112	Bin_37_1	Geobacter sp.
GCA_009885595.1	VFKJ00000000	SAMN12036135	Bin_62_4	Myxococcales bacterium
GCA_009886095.1	VFJL00000000	SAMN12036111	Bin_61_7	Nitrosomonadales bacterium
GCA_009885185.1	VFLF00000000	SAMN12036157	Bin_55_1	Nitrosomonadales bacterium
GCA_009885705.1	VFKF00000000	SAMN12036131	Bin_54_10	Nitrospira sp.
GCA_009885425.1	VFKS00000000	SAMN12036144	Bin_1_14	Novosphingobium sp.
GCA_009885755.1	VFKB00000000	SAMN12036127	Bin_65_10	Parachlamydiales bacterium
GCA_009885615.1	VFKH00000000	SAMN12036133	Bin_61_76	Parachlamydiales bacterium
GCA_009886015.1	VFJP00000000	SAMN12036115	Bin_53_6	Planctomycetaceae bacterium
GCA_009885655.1	VFKG00000000	SAMN12036132	Bin_75_16	Planctomycetaceae bacterium
GCA_009885375.1	VFKV00000000	SAMN12036147	Bin_7_25	Planctomycetaceae bacterium
GCA_009885135.1	VFLL00000000	SAMN12036163	Bin_22_4	Planctomycetaceae bacterium
GCA_009885865.1	VFJX00000000	SAMN12036123	Bin_53_7	Planctomycetota bacterium
GCA_009885825.1	VFJY00000000	SAMN12036124	Bin_29_15	Rhodobiaceae bacterium
GCA_009885515.1	VFKO00000000	SAMN12036140	Bin_29_10	Rhodobiaceae bacterium
GCA_009885175.1	VFLD00000000	SAMN12036155	Bin_28_10	Rhodoferax sp.
GCA_009885795.1	VFKA00000000	SAMN12036126	Bin_16_5	Rhodospirillales bacterium
GCA_009885415.1	VFKU00000000	SAMN12036146	Bin_8_9	Rhodothermota bacterium
GCA_009885105.1	VFLI00000000	SAMN12036160	Bin_58_12	Spirochaetia bacterium
GCA_009885955.1	VFJS00000000	SAMN12036118	Bin_56_1	Spirochaetia bacterium
GCA_009914645.1	VFLB00000000	SAMN12036153	Bin_79_3	Synechococcaceae bacterium Bin_79_3
GCA_009885905.1	VFJU00000000	SAMN12036120	Bin_54_1	Verrucomicrobiota bacterium
GCA_009885995.1	VFJQ00000000	SAMN12036116	Bin_38_5	Verrucomicrobiota bacterium
GCA_009886045.1	VFJO00000000	SAMN12036114	Bin_73_16	Verrucomicrobiota bacterium
GCA_009885695.1	VFKE00000000	SAMN12036130	Bin_29_9	Verrucomicrobiota bacterium
GCA_009885275.1	VFKY00000000	SAMN12036150	Bin_73_2	Verrucomicrobiota bacterium
GCA_009885215.1	VFLC00000000	SAMN12036154	Bin_29_1	Verrucomicrobiota bacterium
GCA_009885305.1	VFKZ00000000	SAMN12036151	Bin_65_9	bacterium
GCA_009885075.1	VFLJ00000000	SAMN12036161	Bin_56_3	bacterium
GCA_009885735.1	VFKD00000000	SAMN12036129	Bin_57_9	bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	190
Data volume, Mbytes	74763

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freshwater sediment metagenome

High-Arctic lake sediments are enriched in novel Metagenome Assembled Genomes fit for low temperature and oligotrophy

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