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Accession: PRJNA947390 ID: 947390

Metagenomic sequencing of groundwater for drinking water production in the Netherlands

Illumina reads from aquifer / groundwater for drinking water production from the Netherlands. More...

Accession	PRJNA947390
Data Type	Raw sequence reads
Scope	Multispecies
Publications	Hauptfeld E et al., "Integrating taxonomic signals from MAGs and contigs improves read annotation and taxonomic profiling of metagenomes.", Nat Commun, 2024 Apr 20;15(1):3373
Submission	Registration date: 22-Mar-2023 Wageningen University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	18
Publications
PubMed	1
PMC	1
Other datasets
BioSample	18
Assembly	18

Assembly details:

Assembly level

Number of Assemblies

Contig

18
18

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_041643195.1		JBGGHF000000000	SAMN33849215	W22-6	groundwater metagenome
GCA_041643235.1		JBGGGZ000000000	SAMN33849209	W19-6	groundwater metagenome
GCA_041643215.1		JBGGHB000000000	SAMN33849211	W22-2	groundwater metagenome
GCA_041643155.1		JBGGHC000000000	SAMN33849212	W22-3	groundwater metagenome
GCA_041643135.1		JBGGHD000000000	SAMN33849213	W22-4	groundwater metagenome
GCA_041643115.1		JBGGHG000000000	SAMN33849216	W23-1	groundwater metagenome
GCA_041643175.1		JBGGHA000000000	SAMN33849210	W22-1	groundwater metagenome
GCA_041643095.1		JBGGHE000000000	SAMN33849214	W22-5	groundwater metagenome
GCA_041643075.1		JBGGHH000000000	SAMN33849217	W23-2	groundwater metagenome
GCA_041643055.1		JBGGHI000000000	SAMN33849218	W23-3	groundwater metagenome
GCA_041643025.1		JBGGHK000000000	SAMN33849220	W23-5	groundwater metagenome
GCA_041643015.1		JBGGHJ000000000	SAMN33849219	W23-4	groundwater metagenome
GCA_041642995.1		JBGGHL000000000	SAMN33849221	W23-6	groundwater metagenome
GCA_041643255.1		JBGGGX000000000	SAMN33849207	W19-4	groundwater metagenome
GCA_041643275.1		JBGGGY000000000	SAMN33849208	W19-5	groundwater metagenome
GCA_041643315.1		JBGGGV000000000	SAMN33849205	W19-2	groundwater metagenome
GCA_041643395.1		JBGGGU000000000	SAMN33849204	W19-1	groundwater metagenome
GCA_041643295.1		JBGGGW000000000	SAMN33849206	W19-3	groundwater metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	112
Data volume, Mbytes	47565

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