MNase titration-Seq of Saccharomyces cerevisiae. (ID 911797) - BioProject

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Accession: PRJNA911797 ID: 911797

MNase titration-Seq of Saccharomyces cerevisiae. (brewer's yeast)

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4886 additional projects are related by organism.

We report change in the nucleosome occupancy and accessibility upon deletion of ATP-dependent chromatin remodellers (ISW1, ISW2 & CHD1) in Saccharomyces cerevisiae. More...

Accession	PRJNA911797; GEO: GSE220880
Data Type	Epigenomics
Scope	Multiisolate
Organism	Saccharomyces cerevisiae[Taxonomy ID: 4932] Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae
Publications	Fouziya S et al., "Genome wide nucleosome landscape shapes 3D chromatin organization.", Sci Adv, 2024 Jun 7;10(23):eadn2955
Submission	Registration date: 13-Dec-2022 Genome Organization, Biotechnology, University of Kashmir
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	22
Publications
PubMed	1
PMC	1
Other datasets
BioSample	22
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	458

SRA Data Details

Parameter	Value
Data volume, Gbases	96
Data volume, Mbytes	33111

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MNase titration-Seq of Saccharomyces cerevisiae.
MNase titration-Seq of Saccharomyces cerevisiae.
MNase titration-Seq of Saccharomyces cerevisiae.

BioProject
PREDICTED: Homo sapiens hypoxia inducible factor 3 subunit alpha (HIF3A), transc...
PREDICTED: Homo sapiens hypoxia inducible factor 3 subunit alpha (HIF3A), transcript variant X5, mRNA
gi|2462566893|ref|XM_054321747.1|

Nucleotide
PREDICTED: Homo sapiens hypoxia inducible factor 3 subunit alpha (HIF3A), transc...
PREDICTED: Homo sapiens hypoxia inducible factor 3 subunit alpha (HIF3A), transcript variant X10, mRNA
gi|2217322437|ref|XM_047439215.1|

Nucleotide
PREDICTED: Homo sapiens pregnancy up-regulated nonubiquitous CaM kinase (PNCK), ...
PREDICTED: Homo sapiens pregnancy up-regulated nonubiquitous CaM kinase (PNCK), transcript variant X4, mRNA
gi|2217391065|ref|XM_024452340.2|

Nucleotide
PREDICTED: Homo sapiens potassium sodium-activated channel subfamily T member 1 ...
PREDICTED: Homo sapiens potassium sodium-activated channel subfamily T member 1 (KCNT1), transcript variant X4, mRNA
gi|2462625447|ref|XM_054363323.1|

Nucleotide

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MNase titration-Seq of Saccharomyces cerevisiae. (brewer's yeast)

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