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Accession: PRJNA827808 ID: 827808

Real-time quantitative PCR analysis of gene expression in human colon cancer cells treated with LPS (human)

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Relative mRNA levels of 55 genes were evaluated with the SYBR Green qPCR assays after LPS treatment for 8 h. More...

Accession	PRJNA827808; GEO: GSE200980
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publications (total 3) Less...	Cao H "Lipopolysaccharide regulation of antiinflammatory tristetraprolin family and proinflammatory gene expression in mouse macrophages.", BMC Res Notes, 2024 Mar 19;17(1):82 More... Cao H "Lipopolysaccharide regulation of antiinflammatory tristetraprolin family and proinflammatory gene expression in mouse macrophages.", BMC Res Notes, 2024 Mar 19;17(1):82 Cao H "Bacterial endotoxin lipopolysaccharides regulate gene expression in human colon cancer cells.", BMC Res Notes, 2023 Sep 13;16(1):216 Cao H et al., "Identification of Bcl2 as a Stably Expressed qPCR Reference Gene for Human Colon Cancer Cells Treated with Cottonseed-Derived Gossypol and Bioactive Extracts and Bacteria-Derived Lipopolysaccharides.", Molecules, 2022 Nov 4;27(21) Less...
Submission	Registration date: 18-Apr-2022 Southern Regional Research Center, USDA-ARS
Relevance	Medical

Project Data:

Resource Name	Number of Links
Publications
PubMed	3
PMC	3
Other datasets
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	1

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Real-time quantitative PCR analysis of gene expression in human colon cancer cel...
Real-time quantitative PCR analysis of gene expression in human colon cancer cells treated with LPS
Real-time quantitative PCR analysis of gene expression in human colon cancer cells treated with LPS

BioProject
PREDICTED: Tympanuchus pallidicinctus heparan sulfate-glucosamine 3-sulfotransfe...
PREDICTED: Tympanuchus pallidicinctus heparan sulfate-glucosamine 3-sulfotransferase 5 (HS3ST5), transcript variant X3, mRNA
gi|2413372307|ref|XM_052683488.1|

Nucleotide
IL12RWT_HPOS_D2_003
IL12RWT_HPOS_D2_003

biosample
troponin T, fast skeletal muscle isoform X7 [Homo sapiens]
troponin T, fast skeletal muscle isoform X7 [Homo sapiens]
gi|2462497650|ref|XP_054188428.1|

Protein
E3 ubiquitin-protein ligase NEDD4-like isoform X8 [Homo sapiens]
E3 ubiquitin-protein ligase NEDD4-like isoform X8 [Homo sapiens]
gi|2217316465|ref|XP_006722488.3|

Protein

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