This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA822639; GEO: GSE200024 |
| Type | Umbrella project |
| Publications | Kang S et al., "TRIM40 is a pathogenic driver of inflammatory bowel disease subverting intestinal barrier integrity.", Nat Commun, 2023 Feb 9;14(1):700 |
| Submission | Registration date: 2-Apr-2022
Department of Systems Biology, Yonsei University |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 4 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 4 |
| GEO DataSets | 3 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 267774 |
| Data volume, Processed Mbytes | 5 |
| Data volume, Supplementary Mbytes | 67 |
| Parameter | Value |
|---|
| Data volume, Gbases | 32 |
| Data volume, Mbytes | 9949 |
Analysis of TRIM40 induced gene profiles in intestinal cells encompasses the following 2 sub-projects:
| Project Type | Number of Projects |
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA822641 | Homo sapiens | Analysis of total RNA transcriptome in TRIM40 overexpressing HT-29 cells [RNA-seq] (Department of Systems Biology,...) | | PRJNA822408 | Homo sapiens | Microarray analysis in TRIM40-overexpressing HT-29 cells (Department of Systems Biology,...) |
|