Severe acute respiratory syndrome coronavirus 2 (ID 800356) - BioProject

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Accession: PRJNA800356 ID: 800356

Severe acute respiratory syndrome coronavirus 2

Severe acute respiratory syndrome coronavirus 2 with intra-host recombination during superinfection with Alpha and Epsilon variants

See Genome Information for Severe acute respiratory syndrome-related coronavirus

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This project is a component of the INSDC SARS-CoV-2 Viral Sequencing Data

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407 additional projects are related by organism.

961 additional projects are components of the INSDC SARS-CoV-2 Viral Sequencing Data.

We detected an instance of SARS-CoV-2 superinfection, whereby an individual was simultaneously infected with two distinct viral variants, Alpha (B. More...

Accession	PRJNA800356
Data Type	Genome sequencing
Scope	Monoisolate
Organism	Severe acute respiratory syndrome coronavirus 2[Taxonomy ID: 2697049] Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; Severe acute respiratory syndrome coronavirus 2
Publications	Published online: Wertheim J et al., "Capturing intrahost recombination of SARS-CoV-2 during superinfection with Alpha and Epsilon variants in New York City", medRxiv, 2022;
Submission	Registration date: 25-Jan-2022 NYC DOHMH
Relevance	Evolution
Locus Tag Prefix	L3913

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic RNA)	233
SRA Experiments	5
Protein Sequences	310
Other datasets
BioSample	5

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	328

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Severe acute respiratory syndrome coronavirus 2

Severe acute respiratory syndrome coronavirus 2 with intra-host recombination during superinfection with Alpha and Epsilon variants

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