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Accession: PRJNA727481 ID: 727481

RIP-seq of NAT10 interacted cellular and KSHV transcripts in iSLK-KSHV cells

Flag-RIP-seq was performed in NAT10-Flag overexpressing iSLK-KSHV cells. Overall design: NAT10-Flag and its control RFP-Flag was overexpressed in iSLK-KSHV cells, the Flag-RIP-seq was performed.
AccessionPRJNA727481; GEO: GSE173889
ScopeMultispecies
PublicationsYan Q et al., "NAT10-dependent N(4)-acetylcytidine modification mediates PAN RNA stability, KSHV reactivation, and IFI16-related inflammasome activation.", Nat Commun, 2023 Oct 10;14(1):6327
SubmissionRegistration date: 5-May-2021
Nanjing Medical University
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes7
SRA Data Details
ParameterValue
Data volume, Gbases39
Data volume, Mbytes12180

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