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Accession: PRJNA717137 ID: 717137

Campylobacter jejuni

Campylobacter jejuni Genome sequencing and assembly

See Genome Information for Campylobacter jejuni
Campylobacter jejuni (C. jejuni) is one of the most frequent causes of bacterial gastroenteritis with watery to bloody diarrhea in humans worldwide. More...
AccessionPRJNA717137
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismCampylobacter jejuni[Taxonomy ID: 197]
Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter jejuni
Grants
  • "Defining Campylobacter and immune response related determinants in the pathogenesis of Guillain-Barre syndrome patients in low-income countries" (Grant ID K43 TW011447, Fogarty International Center)
SubmissionRegistration date: 6-Apr-2021
icddr,b
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)47
SRA Experiments47
Other datasets
BioSample48
Assembly47
Assembly details:
Assembly levelNumber of Assemblies
4
43
47
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_032424085.1ContigJANGYM000000000SAMN29243896
ZH15
GCA_032424015.1ContigJANGZC000000000SAMN29243880
BD27
GCA_032424195.1ContigJANGZE000000000SAMN29243878
BD10
GCA_032424035.1ContigJANGYP000000000SAMN29243893
ZH11
GCA_030930745.1ContigJANGZD000000000SAMN29243879
BD22
GCA_030930735.1ContigJANGZB000000000SAMN29243881
BD34
GCA_030930695.1ContigJANGYZ000000000SAMN29243883
BD94
GCA_030930705.1ContigJANGZA000000000SAMN29243882
BD74
GCA_030930675.1ContigJANGYY000000000SAMN29243884
Z211080RS
GCA_030930645.1ContigJANGYX000000000SAMN29243885
Z211080SS
GCA_030930635.1ContigJANGYW000000000SAMN29243886
ZH1
GCA_030930595.1ContigJANGYT000000000SAMN29243889
ZH7
GCA_030930605.1ContigJANGYV000000000SAMN29243887
ZH2
GCA_030930575.1ContigJANGYU000000000SAMN29243888
ZH6
GCA_030930555.1ContigJANGYS000000000SAMN29243890
ZH8
GCA_030930535.1ContigJANGYR000000000SAMN29243891
ZH9
GCA_030930495.1ContigJANGYN000000000SAMN29243895
ZH14
GCA_030930485.1ContigJANGYQ000000000SAMN29243892
ZH10
GCA_030930475.1ContigJANGYO000000000SAMN29243894
ZH12
GCA_030930435.1ContigJANGYK000000000SAMN29243898
ZH18
GCA_030930445.1ContigJANGYL000000000SAMN29243897
ZH16
GCA_030930385.1ContigJANGYJ000000000SAMN29243899
ZH19
GCA_030930375.1ContigJANGYI000000000SAMN29243900
ZH20
GCA_017813755.1ScaffoldJAGIQK000000000SAMN18478981
Z201020SS
GCA_017813725.1ScaffoldJAGIQI000000000SAMN18478942
Z191005SS
GCA_017813695.1ScaffoldJAGIQJ000000000SAMN18478967
Z201020RS
GCA_017813295.1ScaffoldJAGIQH000000000SAMN18477998
Z191005RS
GCA_036596165.1ContigJARFMZ000000000SAMN33589856
Z228014
GCA_036596145.1ContigJARFMO000000000SAMN33589847
Z221130RS
GCA_036596125.1ContigJARFMQ000000000SAMN33589844
Z221146SS
GCA_036578435.1ContigJARFND000000000SAMN33589852
Z228007
GCA_036578425.1ContigJARFNG000000000SAMN33589849
Z228003
GCA_036578405.1ContigJARFNE000000000SAMN33589851
Z228006
GCA_036578385.1ContigJARFNF000000000SAMN33589850
Z228004
GCA_036578345.1ContigJARFNC000000000SAMN33589853
Z228010
GCA_036578315.1ContigJARFMY000000000SAMN33589857
Z228024
GCA_036578305.1ContigJARFNA000000000SAMN33589855
Z228013
GCA_036578285.1ContigJARFNB000000000SAMN33589854
Z228012
GCA_036578265.1ContigJARFMX000000000SAMN33589858
Z212063
GCA_036578245.1ContigJARFMW000000000SAMN33589859
Z212061
GCA_036578225.1ContigJARFMS000000000SAMN33589842
Z221123SS
GCA_036578205.1ContigJARFMV000000000SAMN33589839
Z211097RS
GCA_036578185.1ContigJARFMU000000000SAMN33589840
Z211097SS
GCA_036578165.1ContigJARFMT000000000SAMN33589841
Z221123RS
GCA_036578365.1ContigJARFNH000000000SAMN33589848
Z228001
GCA_036578145.1ContigJARFMR000000000SAMN33589843
Z221146RS
GCA_036578125.1ContigJARFMP000000000SAMN33589845
Z227001SS
SRA Data Details
ParameterValue
Data volume, Gbases29
Data volume, Mbytes12594

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