Escherichia coli (ID 715781) - BioProject

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Accession: PRJNA715781 ID: 715781

Escherichia coli

Genome sequencing of drug-resistant Escherichia coli isolates of animal, human and environmental origin from northwestern Mexico

See Genome Information for Escherichia coli

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9188 additional projects are related by organism.

Antimicrobial resistance (AMR) is a complex and multidimensional phenomenon attributed to the overuse and misuse of antibiotics in the animal, human, and environment sectors. More...

Accession	PRJNA715781
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Publications (total 3) Less...	Magaña-Lizárraga JA et al., "Draft genome sequence of uropathogenic Escherichia coli U13824, a multidrug-resistant (MDR) and extended-spectrum-β-lactamase (ESBL)-producing UPEC strain isolated from an adult woman with urinary tract infection.", Microbiol Resour Announc, 2024 Jun 11;13(6):e0002724 More... Magaña-Lizárraga JA et al., "Draft genome sequence of uropathogenic Escherichia coli U13824, a multidrug-resistant (MDR) and extended-spectrum-β-lactamase (ESBL)-producing UPEC strain isolated from an adult woman with urinary tract infection.", Microbiol Resour Announc, 2024 Jun 11;13(6):e0002724 Magaña-Lizárraga JA et al., "Genomic Profiling of Antibiotic-Resistant Escherichia coli Isolates from Surface Water of Agricultural Drainage in North-Western Mexico: Detection of the International High-Risk Lineages ST410 and ST617.", Microorganisms, 2022 Mar 20;10(3) Magaña-Lizárraga JA et al., "Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing.", J Vis Exp, 2022 Dec 23;(190) Less...
Submission	Registration date: 20-Nov-2023 Universidad Autonoma de Sinaloa
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	15
SRA Experiments	15
Publications
PubMed	3
PMC	2
Other datasets
BioSample	15
Assembly	15

Assembly details:

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15
15

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_033843625.1	JAWXVX000000000	SAMN30247031	ADD169	Escherichia coli
GCA_033843605.1	JAWXVY000000000	SAMN18352999	ADD183	Escherichia coli
GCA_033843585.1	JAWXVW000000000	SAMN18352998	ADD167	Escherichia coli
GCA_033843565.1	JAWXVU000000000	SAMN30247030	ADD105	Escherichia coli
GCA_033843545.1	JAWXVV000000000	SAMN18352997	ADD147	Escherichia coli
GCA_033843525.1	JAWXVT000000000	SAMN30247029	ACM47	Escherichia coli
GCA_033843505.1	JAWXVS000000000	SAMN30247028	ACM22	Escherichia coli
GCA_033843485.1	JAWXVR000000000	SAMN18353000	ACM5	Escherichia coli
GCA_033843465.1	JAWXVQ000000000	SAMN30247025	RBR95	Escherichia coli
GCA_033843445.1	JAWXRF000000000	SAMN18352690	FD20-2	Escherichia coli
GCA_033843425.1	JAWXVP000000000	SAMN30247024	RBR72	Escherichia coli
GCA_033843405.1	JAWXVN000000000	SAMN18352691	FD21-2	Escherichia coli
GCA_033843385.1	JAWXVO000000000	SAMN18352692	RUTI01	Escherichia coli
GCA_033843365.1	JAWXVL000000000	SAMN30247026	U13824	Escherichia coli
GCA_033843345.1	JAWXVM000000000	SAMN18352689	CCDC44-3	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	4
Data volume, Mbytes	1372

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Escherichia coli

Genome sequencing of drug-resistant Escherichia coli isolates of animal, human and environmental origin from northwestern Mexico

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