RNA-seq after DDX41 knockdown in U2OS cells (ID 706394) - BioProject

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Accession: PRJNA706394 ID: 706394

RNA-seq after DDX41 knockdown in U2OS cells (human)

See Genome Information for Homo sapiens

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This project is a component of the MapR in U2OS and HCT116 cells and RNA-seq in U2OS

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4 additional projects are components of the MapR in U2OS and HCT116 cells and RNA-seq in U2OS.

91982 additional projects are related by organism.

Purpose: Investigating transcriptome changes after depletion of DDX41. Methods: mRNA profiles after DDX41 knockdown compared to control knockdown were generated in 5 biological replicates. More...

Accession	PRJNA706394; GEO: GSE168171
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publications	Mosler T et al., "R-loop proximity proteomics identifies a role of DDX41 in transcription-associated genomic instability.", Nat Commun, 2021 Dec 16;12(1):7314
Submission	Registration date: 3-Mar-2021 Institute of Molecular Biology (IMB)
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	10
Publications
PubMed	1
PMC	1
Other datasets
BioSample	10
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	1095

SRA Data Details

Parameter	Value
Data volume, Gbases	25
Data volume, Mbytes	8660

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RNA-seq after DDX41 knockdown in U2OS cells (human)

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