Escherichia coli O104:H4 str. TY-2482 (ID 67657) - BioProject

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Accession: PRJNA67657 ID: 67657

Escherichia coli O104:H4 str. TY-2482

Escherichia coli O104:H4 str. TY-2482 Genome sequencing and assembly

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This project is a component of the Escherichia coli O104:H4 outbreak

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9200 additional projects are related by organism.

35 additional projects are components of the Escherichia coli O104:H4 outbreak.

Escherichia coli TY-2482. This enterohemorrhagic E. coli strain is implicated in the spring 2011 European outbreak EHEC serotype O104.

Accession	PRJNA67657
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli O104:H4 str. TY-2482[Taxonomy ID: 1038844] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli O104:H4 str. TY-2482
Publications	Rohde H et al., "Open-source genomic analysis of Shiga-toxin-producing E. coli O104:H4.", N Engl J Med, 2011 Aug 25;365(8):718-24
Submission	Registration date: 27-Jul-2011 BGI

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3432
WGS master	3
SRA Experiments	4
Publications
PubMed	1
Other datasets
BioSample	5
Assembly	3

Assembly details:

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Assembly level

Number of Assemblies

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Contig

Total

1
2
3

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_000221885.1	AFVR00000000	SAMN02471605	TY-2482	Escherichia coli O104:H4 str. TY-2482
GCA_000221905.2	AFVS00000000	SAMN02471597	TY-2482	Escherichia coli O104:H4 str. TY-2482
GCA_000217695.2	AFOG00000000	SAMN02469354	TY-2482	Escherichia coli O104:H4 str. TY-2482

SRA Data Details

Parameter	Value
Data volume, Gbases	2
Data volume, Mbytes	1382

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LinkOut to external resources

2547132393: Escherichia coli O104:H4 TY-2482 [Integrated Microbial Genomes]
2547132393: Escherichia coli O104:H4 TY-2482
Integrated Microbial Genomes
8011679585: Escherichia coli O104:H4 TY-2482 [Integrated Microbial Genomes]
8011679585: Escherichia coli O104:H4 TY-2482
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
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Escherichia coli O104:H4 str. TY-2482
Escherichia coli O104:H4 str. TY-2482
Escherichia coli O104:H4 str. TY-2482 Genome sequencing and assembly

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