Escherichia coli (ID 675629) - BioProject

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Accession: PRJNA675629 ID: 675629

Escherichia coli

GenomeTrakr Project: Michigan Department of Health and Human Services

See Genome Information for Escherichia coli

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This project is a component of the GenomeTrakr umbrella project for Escherichia coli and Shigella sp.

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52 additional projects are components of the GenomeTrakr umbrella project for Escherichia coli and Shigella sp..

9217 additional projects are related by organism.

Whole genome sequencing of cultured Escherichia coli as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Accession	PRJNA675629
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Submission	Registration date: 25-Oct-2021 Michigan Department of Health and Human Services

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	31
SRA Experiments	31
Other datasets
BioSample	31
Assembly	31

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

31
31

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_020574555.1	ABDJRM000000000	SAMN22483137	PNUSAE086656	Escherichia coli
GCA_020574515.1	ABDJRN000000000	SAMN22483138	PNUSAE086651	Escherichia coli
GCA_020574525.1	ABDJRK000000000	SAMN22483136	PNUSAE086657	Escherichia coli
GCA_020574275.1	ABDJRI000000000	SAMN22483139	PNUSAE086654	Escherichia coli
GCA_020574205.1	ABDJRH000000000	SAMN22483142	PNUSAE086653	Escherichia coli
GCA_020574015.1	ABDJRE000000000	SAMN22483140	PNUSAE086655	Escherichia coli
GCA_020573995.1	ABDJRF000000000	SAMN22483141	PNUSAE086652	Escherichia coli
GCA_020694685.1	ABDOXU000000000	SAMN22777234	PNUSAE087771	Escherichia coli
GCA_020694665.1	ABDOXV000000000	SAMN22777229	PNUSAE087774	Escherichia coli
GCA_020694645.1	ABDOXX000000000	SAMN22777231	PNUSAE087775	Escherichia coli
GCA_020694725.1	ABDOXW000000000	SAMN22777230	PNUSAE087773	Escherichia coli
GCA_020694885.1	ABDOXZ000000000	SAMN22777232	PNUSAE087776	Escherichia coli
GCA_020694865.1	ABDOYC000000000	SAMN22777225	PNUSAE087772	Escherichia coli
GCA_020694845.1	ABDOXY000000000	SAMN22777227	PNUSAE087770	Escherichia coli
GCA_020975025.1	ABEADU000000000	SAMN23390836	PNUSAE087821	Escherichia coli
GCA_021469045.1	ABEQIR000000000	SAMN24896271	PNUSAE087823	Escherichia coli
GCA_021469025.1	ABEQIU000000000	SAMN24896272	PNUSAE087824	Escherichia coli
GCA_021468985.1	ABEQJD000000000	SAMN24896270	PNUSAE087822	Escherichia coli
GCA_034030195.1	ABPGFM000000000	SAMN38562544	PNUSAE160853	Escherichia coli
GCA_034030135.1	ABPGFK000000000	SAMN38562546	PNUSAE160855	Escherichia coli
GCA_034031135.1	ABPGFQ000000000	SAMN38562545	PNUSAE160854	Escherichia coli
GCA_034031115.1	ABPGFP000000000	SAMN38562543	PNUSAE160852	Escherichia coli
GCA_033657005.1	ABOVTC000000000	SAMN35043360	PNUSAE135026	Escherichia coli
GCA_040528205.1	ABTIQM000000000	SAMN42338672	PNUSAE188019	Escherichia coli
GCA_041017185.1	ABTUYL000000000	SAMN43006564	PNUSAE192393	Escherichia coli
GCA_041017065.1	ABTUYG000000000	SAMN43006565	PNUSAE192394	Escherichia coli
GCA_024858625.1	ABHSZL000000000	SAMN30501155	PNUSAE111895	Escherichia coli
GCA_024859185.1	ABHTAL000000000	SAMN30501154	PNUSAE111894	Escherichia coli
GCA_025808455.1	ABIYPF000000000	SAMN31408182	PNUSAE118163	Escherichia coli
GCA_025857735.1	ABJAGV000000000	SAMN31438048	PNUSAE117557	Escherichia coli
GCA_025704525.1	ABIUXS000000000	SAMN31281121	PNUSAE117438	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	12
Data volume, Mbytes	7006

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Escherichia coli

GenomeTrakr Project: Michigan Department of Health and Human Services

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