marine metagenome (ID 664924) - BioProject

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Accession: PRJNA664924 ID: 664924

marine metagenome

Genomes of diverse isolates of the Prochlorococcus high-light adapted clade II in the western Pacific Ocean

We report 20 genome sequences of cultured HLII isolates and 131 co-culture heterotrophic bacterial genomes. The sequenced strains were isolated from the western Pacific Ocean and the South China Sea.

Accession	PRJNA664924
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Submission	Registration date: 30-Mar-2021 China University of Geosciences
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	151
SRA Experiments	20
Other datasets
BioSample	171
Assembly	151

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

98
53
151

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_017643725.1	JAEPMV000000000	SAMN16237238	HCUG1435-1	Allomuricauda sp.
GCA_017643555.1	JAEPNE000000000	SAMN16237247	HCUG1438-4	Allomuricauda sp.
GCA_017643185.1	JAEPNX000000000	SAMN16237266	HXMU1421-1	Allomuricauda sp.
GCA_017641205.1	JAEPPC000000000	SAMN16237297	HXMU1424-6	Allomuricauda sp.
GCA_017641015.1	JAEPPM000000000	SAMN16237307	HXMU1425-9	Allomuricauda sp.
GCA_017640895.1	JAEPPS000000000	SAMN16237313	HXMU1426-3	Allomuricauda sp.
GCA_017640585.1	JAEPQI000000000	SAMN16237329	HXMU1428-6	Allomuricauda sp.
GCA_017640645.1	JAEPQG000000000	SAMN16237327	HXMU1428-4	Alphaproteobacteria bacterium
GCA_017641145.1	JAEPPG000000000	SAMN16237301	HXMU1425-2	Alphaproteobacteria bacterium
GCA_017643325.1	JAEPNS000000000	SAMN16237261	HXMU1420-4	Alphaproteobacteria bacterium
GCA_017643735.1	JAEPMX000000000	SAMN16237240	HCUG1435-4	Alphaproteobacteria bacterium
GCA_017643635.1	JAEPNA000000000	SAMN16237243	HCUG1436-4	Alphaproteobacteria bacterium
GCA_017644245.1	JAEPLX000000000	SAMN16237214	HCUG1430-4	Altererythrobacter sp.
GCA_017642985.1	JAEPOH000000000	SAMN16237276	HXMU1421-9	Altererythrobacter sp.
GCA_017641035.1	JAEPPL000000000	SAMN16237306	HXMU1425-8	Altererythrobacter sp.
GCA_017640965.1	JAEPPO000000000	SAMN16237309	HXMU1426-10	Altererythrobacter sp.
GCA_017640445.1	JAEPQQ000000000	SAMN16237337	HXMU1429-3	Bacteroidia bacterium
GCA_017640785.1	JAEPPZ000000000	SAMN16237320	HXMU1428-10	Balneola sp.
GCA_017641115.1	JAEPPH000000000	SAMN16237302	HXMU1425-3	Balneola sp.
GCA_017641345.1	JAEPOU000000000	SAMN16237289	HXMU1423-6	Balneola sp.
GCA_017643005.1	JAEPOI000000000	SAMN16237277	HXMU1422-1	Balneola sp.
GCA_017643645.1	JAEPNB000000000	SAMN16237244	HCUG1436-7	Balneola sp.
GCA_017643445.1	JAEPNL000000000	SAMN16237254	HXMU1420-1	Balneola sp.
GCA_017643365.1	JAEPNO000000000	SAMN16237257	HXMU1420-13	Balneolaceae bacterium
GCA_017641305.1	JAEPOZ000000000	SAMN16237294	HXMU1424-2	Balneolaceae bacterium
GCA_017640545.1	JAEPQM000000000	SAMN16237333	HXMU1429-10	Balneolaceae bacterium
GCA_017640665.1	JAEPQE000000000	SAMN16237325	HXMU1428-16	Balneolaceae bacterium
GCA_017640605.1	JAEPQH000000000	SAMN16237328	HXMU1428-5	Balneolaceae bacterium
GCA_017644045.1	JAEPMI000000000	SAMN16237225	HCUG1432-5	Deltaproteobacteria bacterium
GCA_017643385.1	JAEPNN000000000	SAMN16237256	HXMU1420-12	Dinoroseobacter sp.
GCA_017640565.1	JAEPQJ000000000	SAMN16237330	HXMU1428-8	Erythrobacter sp.
GCA_017640525.1	JAEPQL000000000	SAMN16237332	HXMU1429-1	Erythrobacter sp.
GCA_017643265.1	JAEPNU000000000	SAMN16237263	HXMU1420-6	Erythrobacter sp.
GCA_017640865.1	JAEPPU000000000	SAMN16237315	HXMU1426-6	Gracilimonas sp.
GCA_017641085.1	JAEPPI000000000	SAMN16237303	HXMU1425-4	Gracilimonas sp.
GCA_017642885.1	JAEPOM000000000	SAMN16237281	HXMU1422-3	Henriciella sp.
GCA_017642765.1	JAEPOY000000000	SAMN16237293	HXMU1424-13	Henriciella sp.
GCA_017642685.1	JAEPPR000000000	SAMN16237312	HXMU1426-2	Hyphomicrobiales bacterium
GCA_017642935.1	JAEPOK000000000	SAMN16237279	HXMU1422-12	Hyphomicrobiales bacterium
GCA_017643105.1	JAEPOB000000000	SAMN16237270	HXMU1421-2	Hyphomicrobiales bacterium
GCA_017644065.1	JAEPMG000000000	SAMN16237223	HCUG1432-2	Hyphomicrobiales bacterium
GCA_017644285.1	JAEPLU000000000	SAMN16237211	HCUG1430-10	Hyphomicrobiales bacterium
GCA_017640685.1	JAEPQF000000000	SAMN16237326	HXMU1428-3	Hyphomicrobiales bacterium
GCA_017640815.1	JAEPPV000000000	SAMN16237316	HXMU1426-7	Hyphomonas sp.
GCA_017640455.1	JAEPQS000000000	SAMN16237339	HXMU1429-5	Kordiimonadaceae bacterium
GCA_017640725.1	JAEPQB000000000	SAMN16237322	HXMU1428-12	Kordiimonadaceae bacterium
GCA_017644265.1	JAEPLV000000000	SAMN16237212	HCUG1430-2	Kordiimonadaceae bacterium
GCA_017643475.1	JAEPNI000000000	SAMN16237251	HCUG1439-2	Maricaulis sp.
GCA_017643585.1	JAEPND000000000	SAMN16237246	HCUG1438-2	Maricaulis sp.
GCA_017643805.1	JAEPMS000000000	SAMN16237235	HCUG1434-4	Maricaulis sp.
GCA_017642925.1	JAEPOL000000000	SAMN16237280	HXMU1422-2	Maricaulis sp.
GCA_017643065.1	JAEPOD000000000	SAMN16237272	HXMU1421-4	Maricaulis sp.
GCA_017643305.1	JAEPNQ000000000	SAMN16237259	HXMU1420-2	Marinibacterium sp.
GCA_017643815.1	JAEPMT000000000	SAMN16237236	HCUG1434-5	Marinobacter sp.
GCA_017643545.1	JAEPNG000000000	SAMN16237249	HCUG1438-7	Marinobacter sp.
GCA_017643965.1	JAEPMM000000000	SAMN16237229	HCUG1433-3	Marinobacter sp.
GCA_017643905.1	JAEPMO000000000	SAMN16237231	HCUG1433-5	Marivita sp.
GCA_017643845.1	JAEPMR000000000	SAMN16237234	HCUG1434-3	Marivivens sp.
GCA_017640745.1	JAEPQA000000000	SAMN16237321	HXMU1428-11	Nisaea sp.
GCA_017643985.1	JAEPMK000000000	SAMN16237227	HCUG1432-8	Parvibaculum sp.
GCA_017643205.1	JAEPOA000000000	SAMN16237269	HXMU1421-13	Parvibaculum sp.
GCA_017642845.1	JAEPOP000000000	SAMN16237284	HXMU1422-6	Parvibaculum sp.
GCA_017642795.1	JAEPOS000000000	SAMN16237287	HXMU1423-4	Parvibaculum sp.
GCA_017642725.1	JAEPOW000000000	SAMN16237291	HXMU1424-10	Parvibaculum sp.
GCA_017642695.1	JAEPQD000000000	SAMN16237324	HXMU1428-15	Parvibaculum sp.
GCA_017641165.1	JAEPPE000000000	SAMN16237299	HXMU1425-10	Parvibaculum sp.
GCA_017640485.1	JAEPQP000000000	SAMN16237336	HXMU1429-2	Phycisphaerales bacterium
GCA_017642965.1	JAEPOJ000000000	SAMN16237278	HXMU1422-10	Phycisphaerales bacterium
GCA_017644465.2	JAEPLK000000000	SAMN16237201	CUG1430	Prochlorococcus marinus CUG1430
GCA_017644585.2	JAEPLH000000000	SAMN16237198	XMU1427	Prochlorococcus marinus XMU1427
GCA_017644295.2	JAEPLT000000000	SAMN16237210	CUG1439	Prochlorococcus marinus CUG1439
GCA_017644445.2	JAEPLM000000000	SAMN16237203	CUG1432	Prochlorococcus marinus CUG1432
GCA_017644615.2	JAEPLD000000000	SAMN16237194	XMU1423	Prochlorococcus marinus XMU1423
GCA_017644685.2	JAEPLA000000000	SAMN16237191	XMU1420	Prochlorococcus marinus XMU1420
GCA_017644605.2	JAEPLE000000000	SAMN16237195	XMU1424	Prochlorococcus marinus XMU1424
GCA_017644545.2	JAEPLG000000000	SAMN16237197	XMU1426	Prochlorococcus marinus XMU1426
GCA_017644495.2	JAEPLJ000000000	SAMN16237200	XMU1429	Prochlorococcus marinus XMU1429
GCA_017644555.2	JAEPLF000000000	SAMN16237196	XMU1425	Prochlorococcus marinus XMU1425
GCA_017644345.2	JAEPLQ000000000	SAMN16237207	CUG1436	Prochlorococcus marinus CUG1436
GCA_017644365.2	JAEPLR000000000	SAMN16237208	CUG1437	Prochlorococcus marinus CUG1437
GCA_017644665.1	JAEPLC000000000	SAMN16237193	XMU1422	Prochlorococcus marinus XMU1422
GCA_017644645.1	JAEPLB000000000	SAMN16237192	XMU1421	Prochlorococcus marinus XMU1421
GCA_017644525.1	JAEPLI000000000	SAMN16237199	XMU1428	Prochlorococcus marinus XMU1428
GCA_017644485.1	JAEPLL000000000	SAMN16237202	CUG1431	Prochlorococcus marinus CUG1431
GCA_017644425.1	JAEPLN000000000	SAMN16237204	CUG1433	Prochlorococcus marinus CUG1433
GCA_017644405.1	JAEPLO000000000	SAMN16237205	CUG1434	Prochlorococcus marinus CUG1434
GCA_017644375.1	JAEPLP000000000	SAMN16237206	CUG1435	Prochlorococcus marinus CUG1435
GCA_017644325.1	JAEPLS000000000	SAMN16237209	CUG1438	Prochlorococcus marinus CUG1438
GCA_017642855.1	JAEPOO000000000	SAMN16237283	HXMU1422-5	Pseudomonadales bacterium
GCA_017643465.1	JAEPNJ000000000	SAMN16237252	HCUG1439-4	Pseudomonadales bacterium
GCA_017644205.1	JAEPLZ000000000	SAMN16237216	HCUG1430-6	Pseudomonadales bacterium
GCA_017641215.1	JAEPPB000000000	SAMN16237296	HXMU1424-4	Pseudomonadales bacterium
GCA_017640765.1	JAEPPY000000000	SAMN16237319	HXMU1428-1	Pseudomonadales bacterium
GCA_017640795.1	JAEPPX000000000	SAMN16237318	HXMU1427-2	Pseudomonadales bacterium
GCA_017640885.1	JAEPPT000000000	SAMN16237314	HXMU1426-5	Pseudomonadales bacterium
GCA_017641185.1	JAEPPD000000000	SAMN16237298	HXMU1425-1	Psychroserpens sp.
GCA_017641005.1	JAEPPN000000000	SAMN16237308	HXMU1426-1	Psychroserpens sp.
GCA_017641275.1	JAEPOV000000000	SAMN16237290	HXMU1424-1	Psychroserpens sp.
GCA_017644225.1	JAEPLY000000000	SAMN16237215	HCUG1430-5	Psychroserpens sp.
GCA_017644085.1	JAEPMF000000000	SAMN16237222	HCUG1432-12	Psychroserpens sp.
GCA_017643165.1	JAEPNY000000000	SAMN16237267	HXMU1421-10	Psychroserpens sp.
GCA_017642805.1	JAEPOQ000000000	SAMN16237285	HXMU1422-7	Psychroserpens sp.
GCA_018081585.1	JAEPLW000000000	SAMN16237213	HCUG1430-3	Rhizobiaceae bacterium
GCA_017643115.1	JAEPOE000000000	SAMN16237273	HXMU1421-5	Rhizobiaceae bacterium
GCA_017643025.1	JAEPOG000000000	SAMN16237275	HXMU1421-7	Rhizobiaceae bacterium
GCA_017644105.1	JAEPMD000000000	SAMN16237220	HCUG1432-10	Rhizobiaceae bacterium
GCA_017644005.1	JAEPMJ000000000	SAMN16237226	HCUG1432-7	Rhizobiaceae bacterium
GCA_017643495.1	JAEPNK000000000	SAMN16237253	HCUG1439-5	Rhizobiaceae bacterium
GCA_017640615.1	JAEPQK000000000	SAMN16237331	HXMU1428-9	Rhizobiaceae bacterium
GCA_017640505.1	JAEPQO000000000	SAMN16237335	HXMU1429-12	Rhodospirillales bacterium
GCA_017644185.1	JAEPMA000000000	SAMN16237217	HCUG1430-8	Rhodospirillales bacterium
GCA_017643275.1	JAEPNT000000000	SAMN16237262	HXMU1420-5	Rhodospirillales bacterium
GCA_017642665.1	JAEPQR000000000	SAMN16237338	HXMU1429-4	Rhodothermales bacterium
GCA_017643395.1	JAEPNP000000000	SAMN16237258	HXMU1420-14	Rhodothermales bacterium
GCA_017643765.1	JAEPMU000000000	SAMN16237237	HCUG1434-6	Roseibium sp.
GCA_017644155.1	JAEPMB000000000	SAMN16237218	HCUG1431-1	Roseibium sp.
GCA_017643925.1	JAEPML000000000	SAMN16237228	HCUG1433-1	Roseibium sp.
GCA_017643215.1	JAEPNV000000000	SAMN16237264	HXMU1420-7	Roseibium sp.
GCA_017640425.1	JAEPQU000000000	SAMN16237341	HXMU1429-8	Roseibium sp.
GCA_017640945.1	JAEPPQ000000000	SAMN16237311	HXMU1426-12	Roseicyclus sp.
GCA_017641105.1	JAEPPF000000000	SAMN16237300	HXMU1425-11	Roseicyclus sp.
GCA_017644125.1	JAEPME000000000	SAMN16237221	HCUG1432-11	Roseicyclus sp.
GCA_017644145.1	JAEPMC000000000	SAMN16237219	HCUG1432-1	Roseitalea sp.
GCA_017643695.1	JAEPMZ000000000	SAMN16237242	HCUG1436-3	Roseitalea sp.
GCA_017643145.1	JAEPNZ000000000	SAMN16237268	HXMU1421-11	Roseitalea sp.
GCA_017643045.1	JAEPOF000000000	SAMN16237274	HXMU1421-6	Roseitalea sp.
GCA_017642895.1	JAEPON000000000	SAMN16237282	HXMU1422-4	Roseitalea sp.
GCA_017642785.1	JAEPOR000000000	SAMN16237286	HXMU1422-8	Roseitalea sp.
GCA_017642745.1	JAEPOT000000000	SAMN16237288	HXMU1423-5	Roseitalea sp.
GCA_017640985.1	JAEPPK000000000	SAMN16237305	HXMU1425-7	Roseitalea sp.
GCA_017641065.1	JAEPPJ000000000	SAMN16237304	HXMU1425-5	Roseitalea sp.
GCA_017641265.1	JAEPOX000000000	SAMN16237292	HXMU1424-12	Roseitalea sp.
GCA_017640925.1	JAEPPP000000000	SAMN16237310	HXMU1426-11	Roseitalea sp.
GCA_017640805.1	JAEPPW000000000	SAMN16237317	HXMU1427-1	Roseitalea sp.
GCA_017640675.1	JAEPQC000000000	SAMN16237323	HXMU1428-13	Roseitalea sp.
GCA_017640405.1	JAEPQT000000000	SAMN16237340	HXMU1429-6	Roseivirga sp.
GCA_017641245.1	JAEPPA000000000	SAMN16237295	HXMU1424-3	Roseivirga sp.
GCA_017643085.1	JAEPOC000000000	SAMN16237271	HXMU1421-3	Roseivirga sp.
GCA_017644015.1	JAEPMH000000000	SAMN16237224	HCUG1432-3	Roseivirga sp.
GCA_017643935.1	JAEPMN000000000	SAMN16237230	HCUG1433-4	Shimia sp.
GCA_017643685.1	JAEPMY000000000	SAMN16237241	HCUG1435-5	Sneathiella sp.
GCA_017643245.1	JAEPNW000000000	SAMN16237265	HXMU1420-9	Spongiibacter sp.
GCA_017643785.1	JAEPMW000000000	SAMN16237239	HCUG1435-3	Thalassococcus sp.
GCA_017643625.1	JAEPNC000000000	SAMN16237245	HCUG1437-2	Thalassospira sp.
GCA_017643605.1	JAEPNF000000000	SAMN16237248	HCUG1438-5	Thalassospira sp.
GCA_017643525.1	JAEPNH000000000	SAMN16237250	HCUG1439-1	Thalassospira sp.
GCA_017643345.1	JAEPNR000000000	SAMN16237260	HXMU1420-3	Thalassospira sp.
GCA_017643425.1	JAEPNM000000000	SAMN16237255	HXMU1420-11	Thalassospira sp.
GCA_017643885.1	JAEPMQ000000000	SAMN16237233	HCUG1434-2	Thalassospira sp.
GCA_017642645.1	JAEPQN000000000	SAMN16237334	HXMU1429-11	Thalassospira sp.
GCA_017643855.1	JAEPMP000000000	SAMN16237232	HCUG1434-1	Winogradskyella sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	48
Data volume, Mbytes	16068

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marine metagenome

Genomes of diverse isolates of the Prochlorococcus high-light adapted clade II in the western Pacific Ocean

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