ID 644891 - BioProject

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Accession: PRJNA644891 ID: 644891

Cryphonectria spp. sequences for comparative genomics

Accession	PRJNA644891
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Stauber L et al., "Comparative Genomics Analyses of Lifestyle Transitions at the Origin of an Invasive Fungal Pathogen in the Genus Cryphonectria", mSphere, 2020;5(5) Published online: Stauber L et al., "Temporal changes in pathogen diversity in a perennial plant-pathogen-hyperparasite system", Molecular Ecology, 2022;
Submission	Registration date: 8-Jul-2020 Swiss Federal Research Institute WSL
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	100
SRA Experiments	53
Other datasets
BioSample	100
Assembly	100

Assembly details:

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Assembly level

Number of Assemblies

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Total

100
100

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_014849955.1	JACWRQ000000000	SAMN15481972	CS3	Cryphonectria carpinicola
GCA_014849695.1	JACWRE000000000	SAMN15482008	M9290	Cryphonectria carpinicola
GCA_014849835.1	JACWRV000000000	SAMN15481976	ES5	Cryphonectria japonica
GCA_014849795.1	JACWRX000000000	SAMN15481977	IF-6	Cryphonectria japonica
GCA_014851275.1	JACWTT000000000	SAMN15482007	M9249	Cryphonectria japonica
GCA_014850475.1	JACWST000000000	SAMN15481987	M3664	Cryphonectria naterciae
GCA_014850565.1	JACWSS000000000	SAMN15481986	M3656	Cryphonectria naterciae
GCA_014850505.1	JACWSU000000000	SAMN15481988	M3671	Cryphonectria parasitica
GCA_014850035.1	JACWRM000000000	SAMN13975385	BC47B	Cryphonectria parasitica
GCA_014851385.1	JACWTZ000000000	SAMN13975529	NE202	Cryphonectria parasitica
GCA_014851355.1	JACWTR000000000	SAMN15482005	M8568	Cryphonectria parasitica
GCA_014851345.1	JACWTS000000000	SAMN15482006	M9077	Cryphonectria parasitica
GCA_014850305.1	JACWTD000000000	SAMN13975483	M5100	Cryphonectria parasitica
GCA_014850295.1	JACWTE000000000	SAMN13975484	M5266	Cryphonectria parasitica
GCA_014850265.1	JACWTF000000000	SAMN15481995	M5386	Cryphonectria parasitica
GCA_014850275.1	JACWTG000000000	SAMN13975486	M5444	Cryphonectria parasitica
GCA_014850235.1	JACWTH000000000	SAMN13975492	M6821	Cryphonectria parasitica
GCA_014850165.1	JACWTJ000000000	SAMN15481999	M8166	Cryphonectria parasitica
GCA_014850205.1	JACWTM000000000	SAMN15482001	M8444	Cryphonectria parasitica
GCA_014850175.1	JACWTK000000000	SAMN13975508	M8343	Cryphonectria parasitica
GCA_014850185.1	JACWTI000000000	SAMN13975507	M8082	Cryphonectria parasitica
GCA_014850145.1	JACWTL000000000	SAMN15482000	M8422	Cryphonectria parasitica
GCA_014850105.1	JACWTO000000000	SAMN13975509	M8515	Cryphonectria parasitica
GCA_014850075.1	JACWTP000000000	SAMN13975510	M8539	Cryphonectria parasitica
GCA_014850065.1	JACWTQ000000000	SAMN15482004	M8566	Cryphonectria parasitica
GCA_014850095.1	JACWTN000000000	SAMN15482003	M8510	Cryphonectria parasitica
GCA_014849745.1	JACWRC000000000	SAMN15481998	M8109	Cryphonectria parasitica
GCA_014849655.1	JACWRH000000000	SAMN15482013	OK-17	Cryphonectria parasitica
GCA_014849715.1	JACWRD000000000	SAMN15482002	M8499	Cryphonectria parasitica
GCA_014849605.1	JACWRK000000000	SAMN15482020	WB-9	Cryphonectria parasitica
GCA_014849675.1	JACWRF000000000	SAMN13975530	NE230	Cryphonectria parasitica
GCA_014849945.1	JACWRR000000000	SAMN15481973	DU-2	Cryphonectria parasitica
GCA_014849765.1	JACWRB000000000	SAMN15481997	M7832	Cryphonectria parasitica
GCA_014849905.1	JACWRT000000000	SAMN15481974	ES-34	Cryphonectria parasitica
GCA_014849855.1	JACWRU000000000	SAMN15481975	ES-8	Cryphonectria parasitica
GCA_014849815.1	JACWRY000000000	SAMN13975419	KY7	Cryphonectria parasitica
GCA_014849805.1	JACWRW000000000	SAMN13975404	GEZ45	Cryphonectria parasitica
GCA_014849965.1	JACWRO000000000	SAMN13975392	CR03	Cryphonectria parasitica
GCA_014849935.1	JACWRP000000000	SAMN13975393	CR40	Cryphonectria parasitica
GCA_014849915.1	JACWRS000000000	SAMN13975402	DU5	Cryphonectria parasitica
GCA_014849635.1	JACWRI000000000	SAMN15482015	S31	Cryphonectria parasitica
GCA_014849585.1	JACWRJ000000000	SAMN15482017	TA51	Cryphonectria parasitica
GCA_014849665.1	JACWRG000000000	SAMN15482012	OB5-35	Cryphonectria parasitica
GCA_014849555.1	JACWRL000000000	SAMN15482023	ZW-22	Cryphonectria parasitica
GCA_014849385.1	JACWQQ000000000	SAMN15481978	LB86	Cryphonectria parasitica
GCA_014849395.1	JACWQR000000000	SAMN13975424	M1405	Cryphonectria parasitica
GCA_014849345.1	JACWQS000000000	SAMN15481979	M1729	Cryphonectria parasitica
GCA_014849295.1	JACWQU000000000	SAMN15481982	M2207	Cryphonectria parasitica
GCA_014849415.1	JACWQP000000000	SAMN15481971	BRU-2	Cryphonectria parasitica
GCA_014849305.1	JACWQT000000000	SAMN13975447	M1818	Cryphonectria parasitica
GCA_014849285.1	JACWQZ000000000	SAMN13975485	M5398	Cryphonectria parasitica
GCA_014849235.1	JACWQX000000000	SAMN13975466	M4009	Cryphonectria parasitica
GCA_014849195.1	JACWRA000000000	SAMN15481996	M7776	Cryphonectria parasitica
GCA_014850005.1	JACWRN000000000	SAMN13975387	BE22	Cryphonectria parasitica
GCA_014849245.1	JACWQY000000000	SAMN13975471	M4092	Cryphonectria parasitica
GCA_014850425.1	JACWSX000000000	SAMN13975470	M4030	Cryphonectria parasitica
GCA_014850485.1	JACWSV000000000	SAMN15481989	M3904	Cryphonectria parasitica
GCA_014850445.1	JACWSW000000000	SAMN13975467	M4020	Cryphonectria parasitica
GCA_014850395.1	JACWSZ000000000	SAMN15481991	M4327	Cryphonectria parasitica
GCA_014850415.1	JACWSY000000000	SAMN15481990	M4316	Cryphonectria parasitica
GCA_014850365.1	JACWTB000000000	SAMN15481993	M4354	Cryphonectria parasitica
GCA_014850375.1	JACWTA000000000	SAMN15481992	M4342	Cryphonectria parasitica
GCA_014851245.1	JACWTW000000000	SAMN15482009	MD-1	Cryphonectria parasitica
GCA_014851265.1	JACWTU000000000	SAMN13975513	M931	Cryphonectria parasitica
GCA_014851255.1	JACWTV000000000	SAMN13975520	MAK23	Cryphonectria parasitica
GCA_014851215.1	JACWTX000000000	SAMN13975523	Mul63B	Cryphonectria parasitica
GCA_014851205.1	JACWTY000000000	SAMN13975524	NE155	Cryphonectria parasitica
GCA_014851185.1	JACWUA000000000	SAMN15482010	NH-4	Cryphonectria parasitica
GCA_014851155.1	JACWUB000000000	SAMN15482011	OB5-15	Cryphonectria parasitica
GCA_014851135.1	JACWUD000000000	SAMN15482014	OK-26	Cryphonectria parasitica
GCA_014851095.1	JACWUE000000000	SAMN13975539	OZ07C	Cryphonectria parasitica
GCA_014851085.1	JACWUF000000000	SAMN15482016	S35	Cryphonectria parasitica
GCA_014851075.1	JACWUH000000000	SAMN15482019	WB-3	Cryphonectria parasitica
GCA_014851035.1	JACWUG000000000	SAMN15482018	TA59	Cryphonectria parasitica
GCA_014850995.1	JACWUJ000000000	SAMN15482022	XA19	Cryphonectria parasitica
GCA_014851005.1	JACWUK000000000	SAMN13975570	ZB05	Cryphonectria parasitica
GCA_014850965.1	JACWUI000000000	SAMN15482021	XA10	Cryphonectria parasitica
GCA_014850905.1	JACWRZ000000000	SAMN13975422	M1397	Cryphonectria parasitica
GCA_014850875.1	JACWSB000000000	SAMN13975427	M1415	Cryphonectria parasitica
GCA_014850895.1	JACWSD000000000	SAMN13975441	M1797	Cryphonectria parasitica
GCA_014850885.1	JACWSA000000000	SAMN13975423	M1400	Cryphonectria parasitica
GCA_014850845.1	JACWSE000000000	SAMN13975445	M1805	Cryphonectria parasitica
GCA_014850825.1	JACWSC000000000	SAMN13975440	M1793	Cryphonectria parasitica
GCA_014850805.1	JACWSF000000000	SAMN13975446	M1808	Cryphonectria parasitica
GCA_014850795.1	JACWSG000000000	SAMN13975451	M1834	Cryphonectria parasitica
GCA_014850755.1	JACWSH000000000	SAMN13975453	M1838	Cryphonectria parasitica
GCA_014850695.1	JACWSK000000000	SAMN15481980	M2135	Cryphonectria parasitica
GCA_014850725.1	JACWSL000000000	SAMN15481981	M2141	Cryphonectria parasitica
GCA_014850715.1	JACWSJ000000000	SAMN13975456	M1874	Cryphonectria parasitica
GCA_014850705.1	JACWSI000000000	SAMN13975455	M1864	Cryphonectria parasitica
GCA_014850675.1	JACWSM000000000	SAMN13975461	M270	Cryphonectria parasitica
GCA_014850605.1	JACWSO000000000	SAMN13975463	M274	Cryphonectria parasitica
GCA_014850595.1	JACWSP000000000	SAMN13975464	M278	Cryphonectria parasitica
GCA_014850625.1	JACWSN000000000	SAMN13975462	M272	Cryphonectria parasitica
GCA_014850585.1	JACWSQ000000000	SAMN13975465	M296	Cryphonectria parasitica
GCA_014850545.1	JACWSR000000000	SAMN15481985	M3077	Cryphonectria parasitica
GCA_014858425.1	JACWUC000000000	SAMN13975533	OC03	Cryphonectria parasitica
GCA_014850315.1	JACWTC000000000	SAMN15481994	M4733	Cryphonectria radicalis
GCA_014849275.1	JACWQV000000000	SAMN15481983	M2268	Cryphonectria radicalis
GCA_014849355.1	JACWQW000000000	SAMN15481984	M283	Cryphonectria radicalis

SRA Data Details

Parameter	Value
Data volume, Gbases	59
Data volume, Mbytes	20733

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Cryphonectria spp. sequences for comparative genomics

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