This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA605193; GEO: GSE144880 |
| Type | Umbrella project |
| Publications | Tomofuji Y et al., "Chd4 choreographs self-antigen expression for central immune tolerance.", Nat Immunol, 2020 Aug;21(8):892-901 |
| Submission | Registration date: 6-Feb-2020
Takanayagi's lab, Immunology, University of Tokyo |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 30 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 30 |
| GEO DataSets | 4 |
RNA-seq, ChIP-seq, and ATAC-seq analyses of mTECs encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA605199 | Mus musculus | ChIP-seq analysis of Fezf2 in mTECs (Takanayagi's lab, Immunology,...) | | PRJNA605201 | Mus musculus | Genome-wide maps of chromatin state in Fezf2 or Chd4 KO mTECs (Takanayagi's lab, Immunology,...) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA605200 | Mus musculus | RNA-seq analysis on mTECs from Fezf2KO, AireKO and Chd4cKO mice (Takanayagi's lab, Immunology,...) |
|