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Accession: PRJNA549952 ID: 549952

A first exon termination checkpoint that preferentially suppresses extragenic transcription [ChIP-seq Raw W ZC] (house mouse)

See Genome Information for Mus musculus
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This project is a component of the A first exon termination checkpoint that preferentially suppresses extragenic transcription
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6 additional projects are components of the A first exon termination checkpoint that preferentially suppresses extragenic transcription.
69653 additional projects are related by organism.
Wdr82 and Zc3h4 repress transcription at extragenic sites. Overall design: Transcriptome analysis to measure transcription in cells depleted of Wdr82, Zc3h4or other known termination factors.
AccessionPRJNA549952; GEO: GSE133103
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsAustenaa LMI et al., "A first exon termination checkpoint preferentially suppresses extragenic transcription.", Nat Struct Mol Biol, 2021 Apr;28(4):337-346
SubmissionRegistration date: 20-Jun-2019
Gioacchino Natoli Lab, Department of Experimental Oncology, European Institute of Oncology (IEO)
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments5
Publications
PubMed1
PMC1
Other datasets
BioSample5
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1242
SRA Data Details
ParameterValue
Data volume, Gbases19
Data volume, Mbytes7795

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