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Accession: PRJNA473122 ID: 473122

Klebsiella variicola

Population structure, antibiotic resistance, and uropathogenecity of Klebsiella variicola

Klebsiella variicola, Klebsiella pneumoniae, and a Citrobacter fruendii genome used in Potter et al. Genome sequencing and assembly
AccessionPRJNA473122
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 25-May-2018
Washington University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)10073
WGS master113
SRA Experiments113
Protein Sequences607419
Other datasets
BioSample113
Assembly113
Assembly details:
Assembly levelNumber of Assemblies
113
113
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003195445.1ContigQIWN00000000SAMN09266862
WUSM_CF_61
GCA_003255785.1ContigQIWF00000000SAMN09266870
WUSM_KP_69
GCA_003253875.1ContigQIWA00000000SAMN09266875
WUSM_KP_74
GCA_003253855.1ContigQIVV00000000SAMN09266880
WUSM_KP_79
GCA_003197035.1ContigQIXI00000000SAMN09266841
WUSM_KP_40
GCA_003196935.1ContigQIWQ00000000SAMN09266859
WUSM_KP_58
GCA_003196915.1ContigQIWO00000000SAMN09266861
WUSM_KP_60
GCA_003196895.1ContigQIWM00000000SAMN09266863
WUSM_KP_62
GCA_003196875.1ContigQIVX00000000SAMN09266878
WUSM_KP_77
GCA_003196835.1ContigQIVT00000000SAMN09266882
WUSM_KP_81
GCA_003196855.1ContigQIVW00000000SAMN09266879
WUSM_KP_78
GCA_003196815.1ContigQIVO00000000SAMN09266887
WUSM_KP_86
GCA_003196795.1ContigQIVJ00000000SAMN09266892
WUSM_KP_91
GCA_003196775.1ContigQIVH00000000SAMN09266894
WUSM_KP_93
GCA_003196695.1ContigQIVE00000000SAMN09266897
WUSM_KP_96
GCA_003196715.1ContigQIVG00000000SAMN09266895
WUSM_KP_94
GCA_003196655.1ContigQIVC00000000SAMN09266899
WUSM_KP_98
GCA_003195655.1ContigQIVY00000000SAMN09266877
WUSM_KP_76
GCA_003195615.1ContigQIVR00000000SAMN09266884
WUSM_KP_83
GCA_003195575.1ContigQIVQ00000000SAMN09266885
WUSM_KP_84
GCA_003195435.1ContigQIVU00000000SAMN09266881
WUSM_KP_80
GCA_003195395.1ContigQIVM00000000SAMN09266889
WUSM_KP_88
GCA_003195415.1ContigQIVP00000000SAMN09266886
WUSM_KP_85
GCA_003195535.1ContigQIWE00000000SAMN09266871
WUSM_KP_70
GCA_003195325.1ContigQIVI00000000SAMN09266893
WUSM_KP_92
GCA_003195335.1ContigQIVK00000000SAMN09266891
WUSM_KP_90
GCA_003195315.1ContigQIVF00000000SAMN09266896
WUSM_KP_95
GCA_003195295.1ContigQIVB00000000SAMN09266900
WUSM_KP_99
GCA_003195275.1ContigQIUY00000000SAMN09266903
WUSM_KP_102
GCA_003195235.1ContigQIUS00000000SAMN09266909
WUSM_KP_108
GCA_003195245.1ContigQIUW00000000SAMN09266905
WUSM_KP_104
GCA_003195215.1ContigQIUX00000000SAMN09266904
WUSM_KP_103
GCA_003195195.1ContigQIUR00000000SAMN09266910
WUSM_KP_109
GCA_003195145.1ContigQIUN00000000SAMN09266914
WUSM_KP_113
GCA_003196295.1ContigQIYC00000000SAMN09266821
WUSM_KP_20
GCA_003196615.1ContigQIUZ00000000SAMN09266902
WUSM_KP_101
GCA_003196595.1ContigQIUV00000000SAMN09266906
WUSM_KP_105
GCA_003196575.1ContigQIUU00000000SAMN09266907
WUSM_KP_106
GCA_003196555.1ContigQIUT00000000SAMN09266908
WUSM_KP_107
GCA_003196535.1ContigQIUQ00000000SAMN09266911
WUSM_KP_110
GCA_003196515.1ContigQIUO00000000SAMN09266913
WUSM_KP_112
GCA_003195915.1ContigQIWS00000000SAMN09266857
WUSM_KP_56
GCA_003195895.1ContigQIWL00000000SAMN09266864
WUSM_KP_63
GCA_003195875.1ContigQIWR00000000SAMN09266858
WUSM_KP_57
GCA_003195855.1ContigQIWP00000000SAMN09266860
WUSM_KP_59
GCA_003195835.1ContigQIWK00000000SAMN09266865
WUSM_KP_64
GCA_003195815.1ContigQIWJ00000000SAMN09266866
WUSM_KP_65
GCA_003195795.1ContigQIWI00000000SAMN09266867
WUSM_KP_66
GCA_003195775.1ContigQIWH00000000SAMN09266868
WUSM_KP_67
GCA_003195755.1ContigQIWG00000000SAMN09266869
WUSM_KP_68
GCA_003195735.1ContigQIWD00000000SAMN09266872
WUSM_KP_71
GCA_003195695.1ContigQIWC00000000SAMN09266873
WUSM_KP_72
GCA_003195675.1ContigQIVZ00000000SAMN09266876
WUSM_KP_75
GCA_003195685.1ContigQIWB00000000SAMN09266874
WUSM_KP_73
GCA_003195375.1ContigQIVL00000000SAMN09266890
WUSM_KQ_89
GCA_003195585.1ContigQIVN00000000SAMN09266888
WUSM_KQ_87
GCA_003196635.1ContigQIVA00000000SAMN09266901
WUSM_KQ_100
GCA_003253835.1ContigQIYT00000000SAMN09266804
WUSM_KV_03
GCA_003255775.1ContigQIYV00000000SAMN09266802
WUSM_KV_01
GCA_003196495.1ContigQIYU00000000SAMN09266803
WUSM_KV_02
GCA_003195545.1ContigQIYH00000000SAMN09266816
WUSM_KV_15
GCA_003195515.1ContigQIYS00000000SAMN09266805
WUSM_KV_04
GCA_003195495.1ContigQIWU00000000SAMN09266855
WUSM_KV_54
GCA_003195475.1ContigQIWY00000000SAMN09266851
WUSM_KV_50
GCA_003195165.1ContigQIUP00000000SAMN09266912
WUSM_KV_111
GCA_003195625.1ContigQIVS00000000SAMN09266883
WUSM_KV_82
GCA_003196415.1ContigQIYN00000000SAMN09266810
WUSM_KV_09
GCA_003196375.1ContigQIYI00000000SAMN09266815
WUSM_KV_14
GCA_003196455.1ContigQIYP00000000SAMN09266808
WUSM_KV_07
GCA_003196435.1ContigQIYO00000000SAMN09266809
WUSM_KV_08
GCA_003196385.1ContigQIYM00000000SAMN09266811
WUSM_KV_10
GCA_003196355.1ContigQIYF00000000SAMN09266818
WUSM_KV_17
GCA_003196215.1ContigQIXX00000000SAMN09266826
WUSM_KV_25
GCA_003196335.1ContigQIYE00000000SAMN09266819
WUSM_KV_18
GCA_003196305.1ContigQIYD00000000SAMN09266820
WUSM_KV_19
GCA_003196265.1ContigQIYB00000000SAMN09266822
WUSM_KV_21
GCA_003196255.1ContigQIXZ00000000SAMN09266824
WUSM_KV_23
GCA_003196235.1ContigQIXY00000000SAMN09266825
WUSM_KV_24
GCA_003196185.1ContigQIXV00000000SAMN09266828
WUSM_KV_27
GCA_003196055.1ContigQIXF00000000SAMN09266844
WUSM_KV_43
GCA_003196105.1ContigQIXN00000000SAMN09266836
WUSM_KV_35
GCA_003196175.1ContigQIXT00000000SAMN09266830
WUSM_KV_29
GCA_003196155.1ContigQIXS00000000SAMN09266831
WUSM_KV_30
GCA_003196115.1ContigQIXO00000000SAMN09266835
WUSM_KV_34
GCA_003196095.1ContigQIXK00000000SAMN09266839
WUSM_KV_38
GCA_003195935.1ContigQIWT00000000SAMN09266856
WUSM_KV_55
GCA_003196075.1ContigQIXH00000000SAMN09266842
WUSM_KV_41
GCA_003196015.1ContigQIXB00000000SAMN09266848
WUSM_KV_47
GCA_003196025.1ContigQIXG00000000SAMN09266843
WUSM_KV_42
GCA_003195995.1ContigQIWZ00000000SAMN09266850
WUSM_KV_49
GCA_003195975.1ContigQIWX00000000SAMN09266852
WUSM_KV_51
GCA_003195955.1ContigQIWV00000000SAMN09266854
WUSM_KV_53
GCA_003196665.1ContigQIVD00000000SAMN09266898
WUSM_KV_97
GCA_003196475.1ContigQIYQ00000000SAMN09266807
WUSM_KV_06
GCA_003197015.1ContigQIXC00000000SAMN09266847
WUSM_KV_46
GCA_003197065.1ContigQIXJ00000000SAMN09266840
WUSM_KV_39
GCA_003196995.1ContigQIXD00000000SAMN09266846
WUSM_KV_45
GCA_003197055.1ContigQIXE00000000SAMN09266845
WUSM_KV_44
GCA_003196955.1ContigQIXA00000000SAMN09266849
WUSM_KV_48
GCA_003196975.1ContigQIWW00000000SAMN09266853
WUSM_KV_52
GCA_003197275.1ContigQIYJ00000000SAMN09266814
WUSM_KV_13
GCA_003197255.1ContigQIYG00000000SAMN09266817
WUSM_KV_16
GCA_003197215.1ContigQIXU00000000SAMN09266829
WUSM_KV_28
GCA_003197315.1ContigQIYL00000000SAMN09266812
WUSM_KV_11
GCA_003197335.1ContigQIYR00000000SAMN09266806
WUSM_KV_05
GCA_003197295.1ContigQIYK00000000SAMN09266813
WUSM_KV_12
GCA_003197235.1ContigQIYA00000000SAMN09266823
WUSM_KV_22
GCA_003197195.1ContigQIXW00000000SAMN09266827
WUSM_KV_26
GCA_003197165.1ContigQIXR00000000SAMN09266832
WUSM_KV_31
GCA_003197115.1ContigQIXM00000000SAMN09266837
WUSM_KV_36
GCA_003197155.1ContigQIXQ00000000SAMN09266833
WUSM_KV_32
GCA_003197095.1ContigQIXL00000000SAMN09266838
WUSM_KV_37
GCA_003197135.1ContigQIXP00000000SAMN09266834
WUSM_KV_33
SRA Data Details
ParameterValue
Data volume, Gbases56
Data volume, Mbytes25113

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    Klebsiella variicola
    Population structure, antibiotic resistance, and uropathogenecity of Klebsiella variicola
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