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Accession: PRJNA453991 ID: 453991

Transcriptomic analysis of short-term 17α-ethynylestradiol exposure in two Californian sentinel fish species sardine (Sardinops sagax) and mackerel (Scomber japonicus)

In this study, we carried out RNA sequencing (RNAseq) of liver RNA harvested from wild sardine and mackerel exposed under laboratory conditions to EE2 and developed an analytical framework for transcriptomic analyses of species with limited genomic information. More...
AccessionPRJNA453991; GEO: GSE113780
Data TypeTranscriptome or Gene expression
ScopeMultispecies
PublicationsRenaud L et al., "Transcriptomic analysis of short-term 17α-ethynylestradiol exposure in two Californian sentinel fish species sardine (Sardinops sagax) and mackerel (Scomber japonicus).", Environ Pollut, 2019 Jan;244:926-937
SubmissionRegistration date: 27-Apr-2018
Walton RS311, Pathology, Medical University of South Carolina
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments20
Publications
PubMed1
Other datasets
BioSample20
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases9
Data volume, Mbytes2478

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