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Accession: PRJNA412637 ID: 412637

Eggerthella and Coriobacteriaceae

Eggerthella and Coriobacteriaceae Genome sequencing and assembly

Sequencing of Eggerthella and Coriobacteriaceae strains.
AccessionPRJNA412637
Data TypeGenome sequencing and assembly
ScopeMultispecies
Publications
  • Koppel N et al., "Discovery and characterization of a prevalent human gut bacterial enzyme sufficient for the inactivation of a family of plant toxins.", Elife, 2018 May 15;7
  • Clavel T et al., "Intestinal bacterial communities that produce active estrogen-like compounds enterodiol and enterolactone in humans.", Appl Environ Microbiol, 2005 Oct;71(10):6077-85
SubmissionRegistration date: 29-Sep-2017
UCSF
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2221
WGS master34
SRA Experiments38
Protein Sequences96841
Publications
PubMed2
PMC2
Other datasets
BioSample34
Assembly34
Assembly details:
Assembly levelNumber of Assemblies
14
20
34
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003340325.1ContigPPUT00000000SAMN08365959
OB21 GAM 11
GCA_003340305.1ScaffoldPPUU00000000SAMN08365958
AP38TSA
GCA_006351165.1ScaffoldVEVP00000000SAMN12004410
SECO-MT75m2
GCA_003340465.1ContigPPUM00000000SAMN08365966
32-6-I 6 NA
GCA_003340445.1ScaffoldPPUK00000000SAMN08365968
AB12 #2
GCA_003340395.1ContigPPTY00000000SAMN08365980
FAA1-1-60AUCSF
GCA_003340405.1ContigPPUG00000000SAMN08365972
CC7/5 D5 2
GCA_003340255.1ContigPPUR00000000SAMN08365961
14A
GCA_003340245.1ContigPPUS00000000SAMN08365960
11C
GCA_003340225.1ContigPPUQ00000000SAMN08365962
16A
GCA_003340235.1ScaffoldPPUP00000000SAMN08365963
19C
GCA_003340195.1ScaffoldPPUO00000000SAMN08365964
22C
GCA_003340165.1ContigPPUN00000000SAMN08365965
28B
GCA_003340155.1ContigPPUI00000000SAMN08365970
AN51LG
GCA_003340145.1ContigPPUJ00000000SAMN08365969
AB8 #2
GCA_003340125.1ContigPPUL00000000SAMN08365967
A2
GCA_003340105.1ScaffoldPPUH00000000SAMN08365971
ATCC 25559
GCA_003340075.1ScaffoldPPUF00000000SAMN08365973
CC8/2 BHI2
GCA_003340065.1ContigPPUE00000000SAMN08365974
CC8/6 D5 4
GCA_003340045.1ContigPPUD00000000SAMN08365975
DSM 11767
GCA_003340015.1ScaffoldPPUC00000000SAMN08365976
DSM 11863
GCA_003340005.1ContigPPUB00000000SAMN08365977
DSM 15644
GCA_003339975.1ScaffoldPPUA00000000SAMN08365978
DSM 2243
GCA_003339945.1ScaffoldPPTZ00000000SAMN08365979
UCSF2243
GCA_003339935.1ScaffoldPPTX00000000SAMN08365981
MR1 #12
GCA_003339915.1ContigPPTW00000000SAMN08365982
RC4/6F
GCA_003339885.1ContigPPTV00000000SAMN08365983
Valencia
GCA_003339875.1ContigPPTU00000000SAMN08365984
W1 BHI 6
GCA_003339815.1ContigPPTT00000000SAMN08365985
DSM 16107
GCA_003340385.1ScaffoldPPTS00000000SAMN08365986
3C
GCA_003339845.1ContigPPTR00000000SAMN08365987
28C
GCA_003340345.1ScaffoldPPTQ00000000SAMN08365988
RC2/2 A
GCA_003339805.1ContigPPTP00000000SAMN08365989
anaerobia AP69FAA
GCA_003340315.1ScaffoldPPTO00000000SAMN08365990
OB21 GAM31

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