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2 additional projects are components of the The contribution of the post-transcriptional regulator CsrA to RNA stability and translation and identification of binding partners.
Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli
Overall design: 5 biological replicates of ribosome protected fragments and paired RNA samples from wild type and csrA::kan mutant strains were analyzed
| Accession | PRJNA397635; GEO: GSE102385 |
| Scope | Multiisolate |
| Organism | Escherichia coli str. K-12 substr. MG1655[Taxonomy ID: 511145] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli str. K-12 substr. MG1655 |
| Publications | Potts AH et al., "Global role of the bacterial post-transcriptional regulator CsrA revealed by integrated transcriptomics.", Nat Commun, 2017 Nov 17;8(1):1596 |
| Submission | Registration date: 8-Aug-2017
Dr. Tony Romeo, Department of Microbiology and Cell Science, University of Florida |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 20 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 20 |
| GEO DataSets | 1 |