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Accession: PRJNA392765 ID: 392765

Sus scrofa isolate:201423004 | breed:Cross-bred (pig)

Sus scrofa isolate:201423004 | breed:Cross-bred Genome sequencing and assembly

See Genome Information for Sus scrofa
USMARCv1.0, was assembled using 65× coverage of PacBio long reads from DNA of lung tissue of a cross-bred pig (½ Landrace- ¼ Duroc- ¼ Yorkshire)
AccessionPRJNA392765
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismSus scrofa[Taxonomy ID: 9823]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus; Sus scrofa
Grants
  • "Genomic and metagenomic approaches to enhance efficient and sustainable production of beef cattle and sheep" (Grant ID 5438-31000-085-00D, United States Dept of Agriculture)
SubmissionRegistration date: 18-Dec-2017
USDA ARS
RelevanceAgricultural
Locus Tag PrefixCFM88
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)22
WGS master1
SRA Experiments348
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases979
Data volume, Tbytes1.82

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