Human gammaherpesvirus 8 (ID 390547) - BioProject

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Accession: PRJNA390547 ID: 390547

Human gammaherpesvirus 8

Identification of symmetric methylation of histone H4 arginine 3 on KSHV genome (H4R3me2s ChIP-Seq)

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This project is a component of the Identification of symmetric methylation of histone H4 arginine 3 on KSHV genome

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2 additional projects are components of the Identification of symmetric methylation of histone H4 arginine 3 on KSHV genome.

The objective of this study was to identify the symmetric methylation sites on KSHV genome during latency and lytic reactivation Overall design: KSHV infected, TRExBCBL1-RTA cells were induced with doxycycline for 12h to trigger the lytic reactivation, cells were crosslinked and subjected for chromatin isolation and sonication. More...

Accession	PRJNA390547; GEO: GSE100044
Data Type	Epigenomics
Scope	Multiisolate
Organism	Human gammaherpesvirus 8[Taxonomy ID: 37296] Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Gammaherpesvirinae; Rhadinovirus; Rhadinovirus humangamma8; Human gammaherpesvirus 8
Publications	Strahan RC et al., "KSHV encoded ORF59 modulates histone arginine methylation of the viral genome to promote viral reactivation.", PLoS Pathog, 2017 Jul;13(7):e1006482
Submission	Registration date: 14-Jun-2017 Verma Lab, Microbiology and Immunology, University of Nevada, Reno
Relevance	Unknown

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	8
Publications
PubMed	1
PMC	1
Other datasets
BioSample	8
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	4

SRA Data Details

Parameter	Value
Data volume, Mbases	52
Data volume, Mbytes	15

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Human gammaherpesvirus 8

Identification of symmetric methylation of histone H4 arginine 3 on KSHV genome (H4R3me2s ChIP-Seq)

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