This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA382894; GEO: GSE97794 |
| Type | Umbrella project |
| Publications | Shen N et al., "Divergence in DNA Specificity among Paralogous Transcription Factors Contributes to Their Differential In Vivo Binding.", Cell Syst, 2018 Apr 25;6(4):470-483.e8 |
| Grants | - "New methods for quantitative modeling of protein-DNA interactions" (Grant ID R01 GM117106, National Institute of General Medical Sciences)
|
| Submission | Registration date: 14-Apr-2017
Center for Genomic and Computational Biology, Duke University |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| GEO DataSets | 9 |
Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding encompasses the following 8 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 5 |
BioProject
accession | Organism | Title |
|---|
| PRJNA382895 | Homo sapiens | Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [RG_Elk1Ets1Gabpa_v1] (Center for Genomic and Computational...) | | PRJNA382675 | Homo sapiens | Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [RG_Runx1Runx2_v1] (Center for Genomic and Computational...) | | PRJNA481795 | Homo sapiens | Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [uPBM_Elk1Ets1Gabpa] (Center for Genomic and Computational...) | | PRJNA481796 | Homo sapiens | Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [uPBM_Runx1Runx2] (Center for Genomic and Computational...) | | PRJNA481797 | Homo sapiens | Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [uPBM_E2f1E2f3E2f] (Center for Genomic and Computational...) |
|
| Other | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA383141 | Homo sapiens | Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [RG_E2F1-3-4_cust2_v1] (Center for Genomic and Computational...) | | PRJNA383142 | Homo sapiens | Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [RG_MycMaxMad_v1] (Center for Genomic and Computational...) | | PRJNA399106 | Homo sapiens | Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [uPBM_Elk1Ets1Gabpa_MycMaxMad] (Center for Genomic and Computational...) |
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