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Accession: PRJNA320114 ID: 320114

Pinus taeda (loblolly pine)

Exome capture of ADEPT2 loblolly pine trees

See Genome Information for Pinus taeda
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23 additional projects are related by organism.
Loblolly pine, Pinus taeda L., is the most widely planted and commercially important tree species in the southeastern U. More...
AccessionPRJNA320114
Data TypeRaw sequence reads, Exome, Targeted Locus (Loci), Variation
ScopeEnvironment
OrganismPinus taeda[Taxonomy ID: 3352]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinopsida; Pinidae; Conifers I; Pinales; Pinaceae; Pinus; Pinus subgen. Pinus; Pinus taeda
Publications
  • Published online: Lu M et al., "Exome genotyping, linkage disequilibrium and population structure in loblolly pine (Pinus taeda L.)", BMC Genomics, 2016;17(1)
  • Published online: Lu M et al., "Association genetics of growth and adaptive traits in loblolly pine (Pinus taeda L.) using whole-exome-discovered polymorphisms", Tree Genetics & Genomes, 2017;13(3)
Grants
  • "Pine Integrated Network: Education, Mitigation, and Adaptation Project (PINEMAP)" (Grant ID 2011-68002-30185, USDA National Institute of Food and Agriculture)
SubmissionRegistration date: 29-Apr-2016
Texas A&M University
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments375
Other datasets
BioSample376
SRA Data Details
ParameterValue
Data volume, Gbases1,976
Data volume, Tbytes0.88

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    Pinus taeda
    Exome capture of ADEPT2 loblolly pine trees
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