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Accession: PRJNA297777 ID: 297777

Acinetobacter

Acinetobacter whole-genome sequencing for hospital epidemology

See Genome Information for Acinetobacter baumannii
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2280 additional projects are related by organism.
Using WGS to track hospital outbreaks of Acinetobacter baumannii
AccessionPRJNA297777
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismAcinetobacter[Taxonomy ID: 469]
Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter
Publications
  • Fitzpatrick MA et al., "Influence of ACB complex genospecies on clinical outcomes in a U.S. hospital with high rates of multidrug resistance.", J Infect, 2015 Feb;70(2):144-52
  • Ozer EA et al., "Draft Genome Sequence of Acinetobacter baumannii Strain ABBL099, a Multidrug-Resistant Clinical Outbreak Isolate with a Novel Multilocus Sequence Type.", Genome Announc, 2014 Sep 11;2(5)
Grants
  • "Mechanistic Studies of Patatin-like ToxinsBacterial Predictors of Severe Nosocomial PneumoniaExoU and the Pathogenesis of Pseudomonas Pneumonia" (Grant ID R01 AI053674, National Institute of Allergy and Infectious Diseases)
  • "Validating targets in p. aeruginosa type III secretion using chemical probes" (Grant ID R01 AI099269, National Institute of Allergy and Infectious Diseases)
  • "Translational Research Training in Infectious Diseases" (Grant ID T32 AI095207, National Institute of Allergy and Infectious Diseases)
  • "Pseudomonas aeruginosa Genomic Islands and Virulence" (Grant ID R01 AI075191, National Institute of Allergy and Infectious Diseases)
  • "Mechanism of Azithromycin Activity in Pseudomonas Infections" (Grant ID R21 AI088286, National Institute of Allergy and Infectious Diseases)
  • "Mediators of infection in the Pseudomonas aeruginosa accessory genome" (Grant ID MRSG-13-220-01 - MPC, American Cancer Society)
SubmissionRegistration date: 5-Oct-2015
Northwestern University Feinberg School of Medicine
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)60865
WGS master165
SRA Experiments165
Protein Sequences608548
Publications
PubMed2
PMC2
Other datasets
BioSample165
Assembly165
Genome assemblies, organelles and plasmids:
Assembly GCA_000738845.1 :
NameGenBank
Whole Genome Shotgun AssemblyJPDG00000000
Assembly GCA_001414565.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFA00000000
Assembly GCA_001414575.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFC00000000
Assembly GCA_001414585.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLEZ00000000
Assembly GCA_001414645.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFF00000000
Assembly GCA_001414655.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFG00000000
Assembly GCA_001414685.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFI00000000
Assembly GCA_001414705.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFJ00000000
Assembly GCA_001414725.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFK00000000
Assembly GCA_001414735.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFL00000000
Assembly GCA_001414765.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFM00000000
Assembly GCA_001414785.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFN00000000
Assembly GCA_001414805.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFO00000000
Assembly GCA_001414815.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFB00000000
Assembly GCA_001414835.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFD00000000
Assembly GCA_001414865.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFH00000000
Assembly GCA_001414885.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFP00000000
Assembly GCA_001414905.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFR00000000
Assembly GCA_001414915.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFE00000000
Assembly GCA_001414925.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFQ00000000
Assembly GCA_001414935.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFS00000000
Assembly GCA_001414985.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFW00000000
Assembly GCA_001414995.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFT00000000
Assembly GCA_001415015.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFX00000000
Assembly GCA_001415025.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFY00000000
Assembly GCA_001415065.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGA00000000
Assembly GCA_001415085.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGB00000000
Assembly GCA_001415095.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGD00000000
Assembly GCA_001415105.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGE00000000
Assembly GCA_001415145.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGF00000000
Assembly GCA_001415165.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGG00000000
Assembly GCA_001415175.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGI00000000
Assembly GCA_001415185.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGH00000000
Assembly GCA_001415215.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGL00000000
Assembly GCA_001415245.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGO00000000
Assembly GCA_001415255.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGP00000000
Assembly GCA_001415275.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGS00000000
Assembly GCA_001415295.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFU00000000
Assembly GCA_001415325.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFV00000000
Assembly GCA_001415345.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLFZ00000000
Assembly GCA_001415355.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGC00000000
Assembly GCA_001415385.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGJ00000000
Assembly GCA_001415395.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGK00000000
Assembly GCA_001415425.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGM00000000
Assembly GCA_001415435.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGN00000000
Assembly GCA_001415465.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGQ00000000
Assembly GCA_001415485.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGR00000000
Assembly GCA_001415505.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGT00000000
Assembly GCA_001415515.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGU00000000
Assembly GCA_001415535.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGW00000000
Assembly GCA_001415555.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGZ00000000
Assembly GCA_001415585.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHD00000000
Assembly GCA_001415595.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHE00000000
Assembly GCA_001415615.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHG00000000
Assembly GCA_001415645.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHH00000000
Assembly GCA_001415665.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHI00000000
Assembly GCA_001415685.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHJ00000000
Assembly GCA_001415695.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHK00000000
Assembly GCA_001415715.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHL00000000
Assembly GCA_001415735.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHM00000000
Assembly GCA_001415765.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHN00000000
Assembly GCA_001415785.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHO00000000
Assembly GCA_001415805.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHP00000000
Assembly GCA_001415815.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHR00000000
Assembly GCA_001415835.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHS00000000
Assembly GCA_001415865.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHW00000000
Assembly GCA_001415875.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHX00000000
Assembly GCA_001415895.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHY00000000
Assembly GCA_001415915.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGV00000000
Assembly GCA_001415935.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGX00000000
Assembly GCA_001415965.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLGY00000000
Assembly GCA_001415985.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHA00000000
Assembly GCA_001416005.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHB00000000
Assembly GCA_001416015.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHC00000000
Assembly GCA_001416035.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHF00000000
Assembly GCA_001416065.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHQ00000000
Assembly GCA_001416075.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHT00000000
Assembly GCA_001416095.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHU00000000
Assembly GCA_001416115.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHV00000000
Assembly GCA_001416145.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIB00000000
Assembly GCA_001416155.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIC00000000
Assembly GCA_001416165.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIE00000000
Assembly GCA_001416185.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIF00000000
Assembly GCA_001416225.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIG00000000
Assembly GCA_001416235.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIH00000000
Assembly GCA_001416255.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLII00000000
Assembly GCA_001416275.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIJ00000000
Assembly GCA_001416305.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIL00000000
Assembly GCA_001416315.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIN00000000
Assembly GCA_001416335.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIO00000000
Assembly GCA_001416355.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIQ00000000
Assembly GCA_001416385.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIV00000000
Assembly GCA_001416395.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIX00000000
Assembly GCA_001416415.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIZ00000000
Assembly GCA_001416425.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLJB00000000
Assembly GCA_001416465.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLJC00000000
Assembly GCA_001416475.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLJE00000000
Assembly GCA_001416495.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLJF00000000
Assembly GCA_001416515.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLHZ00000000
Assembly GCA_001416545.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIA00000000
Assembly GCA_001416555.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLID00000000
Assembly GCA_001416565.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIK00000000
Assembly GCA_001416585.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIM00000000
Assembly GCA_001416625.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIP00000000
Assembly GCA_001416635.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIS00000000
Assembly GCA_001416655.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIT00000000
Assembly GCA_001416665.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIW00000000
Assembly GCA_001416705.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIY00000000
Assembly GCA_001416715.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLJA00000000
Assembly GCA_001417485.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIU00000000
Assembly GCA_001417495.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLJD00000000
Assembly GCA_001417515.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLJG00000000
Assembly GCA_001417545.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLIR00000000
Assembly GCA_001432375.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCJ00000000
Assembly GCA_001432385.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCM00000000
Assembly GCA_001432425.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCU00000000
Assembly GCA_001432435.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCV00000000
Assembly GCA_001432445.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCP00000000
Assembly GCA_001432455.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCR00000000
Assembly GCA_001432505.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCW00000000
Assembly GCA_001432525.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCX00000000
Assembly GCA_001432535.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDA00000000
Assembly GCA_001432545.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCY00000000
Assembly GCA_001432585.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDC00000000
Assembly GCA_001432595.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDB00000000
Assembly GCA_001432625.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDD00000000
Assembly GCA_001432635.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDE00000000
Assembly GCA_001432665.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDF00000000
Assembly GCA_001432685.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCI00000000
Assembly GCA_001432705.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCK00000000
Assembly GCA_001432715.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCL00000000
Assembly GCA_001432745.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCN00000000
Assembly GCA_001432755.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCO00000000
Assembly GCA_001432775.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCQ00000000
Assembly GCA_001432785.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCS00000000
Assembly GCA_001432825.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCT00000000
Assembly GCA_001432835.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLCZ00000000
Assembly GCA_001432845.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDG00000000
Assembly GCA_001432865.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDH00000000
Assembly GCA_001432895.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDJ00000000
Assembly GCA_001432925.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDK00000000
Assembly GCA_001432935.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDL00000000
Assembly GCA_001432965.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDP00000000
Assembly GCA_001432975.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDR00000000
Assembly GCA_001433005.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDS00000000
Assembly GCA_001433015.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDY00000000
Assembly GCA_001433045.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLEC00000000
Assembly GCA_001433055.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLEE00000000
Assembly GCA_001433075.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDI00000000
Assembly GCA_001433095.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDM00000000
Assembly GCA_001433125.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDN00000000
Assembly GCA_001433145.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDO00000000
Assembly GCA_001433155.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDQ00000000
Assembly GCA_001433185.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDW00000000
Assembly GCA_001433205.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDZ00000000
Assembly GCA_001433225.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLEB00000000
Assembly GCA_001433245.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLED00000000
Assembly GCA_001433265.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDV00000000
Assembly GCA_001433275.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDX00000000
Assembly GCA_001433295.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLEA00000000
Assembly GCA_001433335.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLEG00000000
Assembly GCA_001433355.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLEF00000000
Assembly GCA_001433655.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDT00000000
Assembly GCA_001433675.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLDU00000000
Assembly GCA_001433695.1 :
NameGenBank
Whole Genome Shotgun AssemblyLLEH00000000
SRA Data Details
ParameterValue
Data volume, Gbases258
Data volume, Tbytes0.18

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