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Accession: PRJNA281410 ID: 281410

Multi-strain, long-read bacterial genome sequencing

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This project is a component of the Multi-species bacterial DNA sequencing in support of DNA methylation binning and plasmid mapping in metagenomic samples
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6 additional projects are components of the Multi-species bacterial DNA sequencing in support of DNA methylation binning and plasmid mapping in metagenomic samples.
To obtain high quality reference assemblies of multiple bacterial genomes and conduct genome-wide analysis of DNA methylation, we sequenced three cultured isolates using a Pacific Biosciences RSII instrument. More...
AccessionPRJNA281410
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsBeaulaurier J et al., "Single molecule-level detection and long read-based phasing of epigenetic variations in bacterial methylomes.", Nat Commun, 2015 Jun 15;6:7438
SubmissionRegistration date: 16-Apr-2015
Icahn School of Medicine at Mount Sinai
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)9
SRA Experiments27
Protein Sequences6770
Publications
PubMed1
PMC1
Other datasets
BioSample6
Assembly2
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases150
Data volume, Tbytes0.24

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