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Accession: PRJNA274795 ID: 274795

Phtheirospermum japonicum

Root transcriptome of the facultative parasitic plant Phtheirospermum japonicum

See Genome Information for Phtheirospermum japonicum
47,984 unigenes with putative coding regions with at least 50 amino acids were selected from whole transcriptome (SAMN03271814) of Phtheirospermum japonicum Microarray slides were hybridized with labeled cRNA from roots of 2-week-old Phtheirospermum japonicum plants growing axenically and treated with haustoria-inducer DMBQ (10 µM) for 0, 0. More...
AccessionPRJNA274795; GEO: GSE65723
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismPhtheirospermum japonicum[Taxonomy ID: 374723]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Orobanchaceae; Rhinantheae; Phtheirospermum; Phtheirospermum japonicum
PublicationsIshida JK et al., "Local Auxin Biosynthesis Mediated by a YUCCA Flavin Monooxygenase Regulates Haustorium Development in the Parasitic Plant Phtheirospermum japonicum.", Plant Cell, 2016 Aug;28(8):1795-814
SubmissionRegistration date: 6-Feb-2015
Plant Immunity Research Group, CSRS, RIKEN
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Publications
PubMed1
PMC1
Other datasets
BioSample1
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots1704304
Data volume, Processed Mbytes56
Data volume, Supplementary Mbytes104
SRA Data Details
ParameterValue
Data volume, Gbases5
Data volume, Mbytes2677

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