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Accession: PRJNA271775 ID: 271775

Acinetobacter baumannii

Genomic sequencing of carbapenem resistant Acinetobacter baumannii from Oregon

See Genome Information for Acinetobacter baumannii
To examine the evolutionary processes underlying the emergence of carbapenem-resistant A. baumannii.
AccessionPRJNA271775
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismAcinetobacter baumannii[Taxonomy ID: 470]
Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii
SubmissionRegistration date: 22-Jan-2016
JCVI
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)18910
WGS master131
Genomic DNA19
SRA Experiments142
Protein Sequences498199
Other datasets
BioSample134
Assembly134
Supplementary data
Base modification3
Assembly details:
Assembly levelNumber of Assemblies
7
127
134
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_001668465.2Complete genomeSAMN05238697
ABUH773
GCA_001674505.2Complete genomeSAMN05238571
ABUH796
GCA_001669145.2Complete genomeSAMN05238672
ABUH793
GCA_001674475.2Complete genomeSAMN05238628
ABUH763
GCA_001896005.1Complete genomeSAMN06077191
AF-401
GCA_001895985.1Complete genomeSAMN06077192
AF-673
GCA_001531205.2ContigLRMK00000000
SAMN04432983
ORABSC
GCA_001531265.2ContigLRMH00000000
SAMN04432980
ORABRicT
GCA_001541045.2ContigLRMI00000000
SAMN04432981
ORABMayT
GCA_001541025.2ContigLRMJ00000000
SAMN04432982
ORAB6b
GCA_001531455.2ContigLRMF00000000
SAMN04432978
ORAB23
GCA_001541035.2ContigLRME00000000
SAMN04432977
ORAB21
GCA_000939635.2ContigJZCD00000000
SAMN03277102
ORAB19
GCA_000939615.2ContigJZCE00000000
SAMN03277096
ORAB18
GCA_000939575.2ContigJZCF00000000
SAMN03277093
ORAB17
GCA_000939555.2ContigJZCG00000000
SAMN03277094
ORAB16
GCA_000939565.2ContigJZCH00000000
SAMN03277104
ORAB15
GCA_000939485.2ContigJZCK00000000
SAMN03277101
ORAB10
GCA_000939495.2ContigJZCJ00000000
SAMN03277098
ORAB13
GCA_000939535.2ContigJZCI00000000
SAMN03277103
ORAB14
GCA_000939475.2ContigJZCL00000000
SAMN03277100
ORAB09
GCA_000939405.2ContigJZCO00000000
SAMN03277097
ORAB02
GCA_000939425.2ContigJZCM00000000
SAMN03277092
ORAB08
GCA_000939395.2ContigJZCN00000000
SAMN03277099
ORAB03
GCA_000939415.2Complete genomeSAMN03277095
ORAB01
GCA_001669705.1ContigLZXL00000000
SAMN05238711
ABUH708
GCA_001669695.1ContigLZXU00000000
SAMN05238692
ABUH765
GCA_001669675.1ContigLZXQ00000000
SAMN05238716
ABUH741
GCA_001669635.1ContigLZWO00000000
SAMN05238664
ABUH779
GCA_001669645.1ContigLZXJ00000000
SAMN05238709
ABUH808
GCA_001669605.1ContigLZWU00000000
SAMN05238670
ABUH789
GCA_001669595.1ContigLZWR00000000
SAMN05238667
ABUH783
GCA_001669575.1ContigLZVN00000000
SAMN05238610
ABUH709
GCA_001669535.1ContigLZVQ00000000
SAMN05238613
ABUH735
GCA_001669505.1ContigLZVR00000000
SAMN05238615
ABUH743
GCA_001669525.1ContigLZUX00000000
SAMN05238594
ABUH812
GCA_001669495.1ContigLZVL00000000
SAMN05238608
ABUH698
GCA_001669455.1ContigLZVG00000000
SAMN05238603
ABUH766
GCA_001669425.1ContigLZUZ00000000
SAMN05238596
ABUH746
GCA_001669435.1ContigLZVE00000000
SAMN05238601
ABUH760
GCA_001669415.1ContigLZUB00000000
SAMN05238683
ABUH759
GCA_001669355.1ContigLZTY00000000
SAMN05238680
ABUH722
GCA_001669305.1ContigLZXS00000000
SAMN05238690
ABUH747
GCA_001669295.1ContigLZXV00000000
SAMN05238693
ABUH776
GCA_001669265.1ContigLZXP00000000
SAMN05238715
ABUH740
GCA_001669255.1ContigLZXN00000000
SAMN05238713
ABUH717
GCA_001669225.1ContigLZXM00000000
SAMN05238712
ABUH715
GCA_001669195.1ContigLZXD00000000
SAMN05238703
ABUH785
GCA_001669185.1ContigLZXC00000000
SAMN05238702
ABUH768
GCA_001669175.1ContigLZXB00000000
SAMN05238592
ABUH806
GCA_001669115.1ContigLZWV00000000
SAMN05238671
ABUH791
GCA_001669105.1ContigLZWT00000000
SAMN05238669
ABUH787
GCA_001669095.1ContigLZWQ00000000
SAMN05238666
ABUH781
GCA_001669075.1ContigLZWN00000000
SAMN05238663
ABUH771
GCA_001669025.1ContigLZWM00000000
SAMN05238662
ABUH770
GCA_001669035.1ContigLZWJ00000000
SAMN05238659
ABUH730
GCA_001669005.1ContigLZWG00000000
SAMN05238656
ABUH719
GCA_001668995.1ContigLZWE00000000
SAMN05238654
ABUH716
GCA_001668955.1ContigLZVY00000000
SAMN05238573
ABUH813
GCA_001668945.1ContigLZUY00000000
SAMN05238595
ABUH736
GCA_001668935.1ContigLZUS00000000
SAMN05238698
ABUH775
GCA_001668915.1ContigLZUQ00000000
SAMN05238696
ABUH767
GCA_001668875.1ContigLZUG00000000
SAMN05238688
ABUH792
GCA_001668855.1ContigLZTP00000000
SAMN05238648
ABUH782
GCA_001668865.1ContigLZVK00000000
SAMN05238607
ABUH695
GCA_001668835.1ContigLZVH00000000
SAMN05238604
ABUH731
GCA_001668815.1ContigLZXW00000000
SAMN05238694
ABUH738
GCA_001668765.1ContigLZTX00000000
SAMN05238679
ABUH713
GCA_001668775.1ContigLZVB00000000
SAMN05238598
ABUH750
GCA_001668755.1ContigLZTT00000000
SAMN05238675
ABUH720
GCA_001669365.1ContigLZTW00000000
SAMN05238678
ABUH702
GCA_001668645.1ContigLZXO00000000
SAMN05238714
ABUH724
GCA_001668555.1ContigLZXT00000000
SAMN05238691
ABUH756
GCA_001668535.1ContigLZXR00000000
SAMN05238717
ABUH744
GCA_001668515.1ContigLZWH00000000
SAMN05238657
ABUH721
GCA_001668475.1ContigLZWI00000000
SAMN05238658
ABUH726
GCA_001668445.1ContigLZUO00000000
SAMN05238587
ABUH714
GCA_001668585.1ContigLZXH00000000
SAMN05238707
ABUH801
GCA_001674915.1ContigLZXK00000000
SAMN05238710
ABUH703
GCA_001674885.1ContigLZXI00000000
SAMN05238708
ABUH802
GCA_001674865.1ContigLZXG00000000
SAMN05238706
ABUH800
GCA_001674845.1ContigLZXF00000000
SAMN05238705
ABUH799
GCA_001674835.1ContigLZXE00000000
SAMN05238704
ABUH798
GCA_001674805.1ContigLZXA00000000
SAMN05238591
ABUH805
GCA_001674785.1ContigLZWY00000000
SAMN05238589
ABUH803
GCA_001674765.1ContigLZWZ00000000
SAMN05238590
ABUH804
GCA_001674755.1ContigLZWX00000000
SAMN05238588
ABUH794
GCA_001674735.1ContigLZWS00000000
SAMN05238668
ABUH784
GCA_001674695.1ContigLZWL00000000
SAMN05238661
ABUH734
GCA_001674705.1ContigLZWP00000000
SAMN05238665
ABUH780
GCA_001674665.1ContigLZWK00000000
SAMN05238660
ABUH733
GCA_001674655.1ContigLZWF00000000
SAMN05238655
ABUH718
GCA_001674635.1ContigLZWD00000000
SAMN05238653
ABUH710
GCA_001674605.1ContigLZWB00000000
SAMN05238651
ABUH705
GCA_001674585.1ContigLZWC00000000
SAMN05238652
ABUH707
GCA_001674575.1ContigLZWA00000000
SAMN05238650
ABUH769
GCA_001674555.1ContigLZVZ00000000
SAMN05238585
ABUH754
GCA_001674515.1ContigLZVX00000000
SAMN05238572
ABUH807
GCA_001674485.1ContigLZVV00000000
SAMN05238570
ABUH795
GCA_001674435.1ContigLZVT00000000
SAMN05238623
ABUH755
GCA_001674425.1ContigLZVS00000000
SAMN05238619
ABUH745
GCA_001674415.1ContigLZVP00000000
SAMN05238612
ABUH728
GCA_001674395.1ContigLZVO00000000
SAMN05238611
ABUH725
GCA_001674365.1ContigLZVI00000000
SAMN05238605
ABUH762
GCA_001674325.1ContigLZVJ00000000
SAMN05238606
ABUH758
GCA_001674345.1ContigLZVM00000000
SAMN05238609
ABUH704
GCA_001674315.1ContigLZVF00000000
SAMN05238602
ABUH761
GCA_001674295.1ContigLZVD00000000
SAMN05238600
ABUH753
GCA_001674245.1ContigLZUW00000000
SAMN05238593
ABUH811
GCA_001674235.1ContigLZVA00000000
SAMN05238597
ABUH748
GCA_001674255.1ContigLZVC00000000
SAMN05238599
ABUH752
GCA_001674215.1ContigLZUV00000000
SAMN05238701
ABUH810
GCA_001674185.1ContigLZUU00000000
SAMN05238700
ABUH797
GCA_001674165.1ContigLZUP00000000
SAMN05238695
ABUH739
GCA_001674155.1ContigLZUT00000000
SAMN05238699
ABUH786
GCA_001674135.1ContigLZUM00000000
SAMN05238647
ABUH778
GCA_001674115.1ContigLZUN00000000
SAMN05238586
ABUH712
GCA_001674075.1ContigLZUL00000000
SAMN05238646
ABUH777
GCA_001674085.1ContigLZUK00000000
SAMN05238642
ABUH749
GCA_001674045.1ContigLZUJ00000000
SAMN05238637
ABUH788
GCA_001674035.1ContigLZUI00000000
SAMN05238632
ABUH809
GCA_001674015.1ContigLZUF00000000
SAMN05238687
ABUH764
GCA_001673985.1ContigLZUH00000000
SAMN05238689
ABUH737
GCA_001673975.1ContigLZUE00000000
SAMN05238686
ABUH814
GCA_001673955.1ContigLZUD00000000
SAMN05238685
ABUH790
GCA_001673915.1ContigLZTZ00000000
SAMN05238681
ABUH723
GCA_001673905.1ContigLZUA00000000
SAMN05238682
ABUH729
GCA_001673895.1ContigLZUC00000000
SAMN05238684
ABUH774
GCA_001673875.1ContigLZTV00000000
SAMN05238677
ABUH699
GCA_001673825.1ContigLZTU00000000
SAMN05238676
ABUH751
GCA_001673805.1ContigLZTS00000000
SAMN05238674
ABUH706
GCA_001673815.1ContigLZTR00000000
SAMN05238673
ABUH696
GCA_001673795.1ContigLZTQ00000000
SAMN05238649
ABUH772
GCA_001531135.1ContigLRMG00000000
SAMN04432979
ORABAshR
SRA Data Details
ParameterValue
Data volume, Gbases182
Data volume, Tbytes0.11

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