Sphingobacterium sp. HMSC13C05 (ID 269864) - BioProject

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Accession: PRJNA269864 ID: 269864

Sphingobacterium sp. HMSC13C05

HMP reference genome

See Genome Information for Sphingobacterium

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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)

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2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).

65 additional projects are related by organism.

HMP reference genome

Accession	PRJNA269864
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Sphingobacterium sp. HMSC13C05[Taxonomy ID: 1581095] Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium; Sphingobacterium sp. HMSC13C05
Submission	Registration date: 17-Oct-2016 The Genome Institute at Washington University
Related Resources	The Genome Institute at Washington University
Relevance	Medical
Locus Tag Prefix	HMPREF3127

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	194
WGS master	1
SRA Experiments	1
Protein Sequences	4820
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_001808025.1	Scaffold	LUAH00000000	SAMN03433342	Sphingobacterium sp. HMSC13C05

SRA Data Details

Parameter	Value
Data volume, Mbases	303
Data volume, Mbytes	224

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The Genome Institute at Washington University
The Genome Institute at Washington University

LinkOut to external resources

GOLD: Gp0549742 [Genomes On Line Database]
GOLD: Gp0549742
Genomes On Line Database
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
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Sphingobacterium sp. HMSC13C05
Sphingobacterium sp. HMSC13C05
HMP reference genome

BioProject
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gi|2217280781|ref|XP_047282195.1|

Protein
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PREDICTED: Otolemur garnettii methyltransferase like 23 (METTL23), transcript variant X1, mRNA
gi|1327790750|ref|XM_003786096.3|

Nucleotide
methyltransferase-like protein 23 isoform X2 [Otolemur garnettii]
methyltransferase-like protein 23 isoform X2 [Otolemur garnettii]
gi|831219974|ref|XP_012658470.1|

Protein
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Sphingobacterium sp. HMSC13C05

HMP reference genome

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