Salmonella enterica subsp. enterica serovar Typhim... (ID 268955) - BioProject

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Accession: PRJNA268955 ID: 268955

Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔdksA and ΔrelAΔspoTΔdksA mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture

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This project is a component of the Transcriptional profiles of Salmonella Typhimurium 4/74 parent and relA spoT, rpoS and dksA strains during stationary phase, and RNA polymerase distribution as determined by chromatin immunoprecipitation in parent, relA spoT and dksA strains

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2 additional projects are components of the Transcriptional profiles of Salmonella Typhimurium 4/74 parent and relA spoT, rpoS and dksA strains during stationary phase, and RNA polymerase distribution as determined by chromatin immunoprecipitation in parent, relA spoT and dksA strains.

3944 additional projects are related by organism.

S. Typhimurium SL1344 parental strain and isogenic ΔrpoS, ΔdksA and ΔrelAΔspoT, ΔrelAΔspoTΔrpoS and ΔrelAΔspoTΔdksA strains were grown to OD600=1. More...

Accession	PRJNA268955; GEO: GSE63713
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344[Taxonomy ID: 216597] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Publications	Rice CJ et al., "Transcriptional and Post-Transcriptional Modulation of SPI1 and SPI2 Expression by ppGpp, RpoS and DksA in Salmonella enterica sv Typhimurium.", PLoS One, 2015;10(6):e0127523
Submission	Registration date: 28-Nov-2014 Institute of Food Research
Relevance	Medical

Project Data:

Resource Name	Number of Links
Publications
PubMed	1
PMC	1
Other datasets
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Spots	241920
Data volume, Processed Mbytes	4
Data volume, Supplementary Mbytes	17

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Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔdksA and ΔrelAΔspoTΔdksA mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture

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