Mus musculus (ID 258094) - BioProject

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Accession: PRJNA258094 ID: 258094

Mus musculus (house mouse)

Single-cell RNA-seq of mouse cerebral cortex

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71558 additional projects are related by organism.

We have applied a recently developed, highly accurate and sensitive single-cell RNA-seq method (STRT/C1) to perform a molecular census of two regions of the mouse cerebral cortex: the somatosensory cortex and hippocampus CA1. More...

Accession	PRJNA258094; GEO: GSE60361
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications	Lake BB et al., "A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA.", Sci Rep, 2017 Jul 20;7(1):6031 Zeisel A et al., "Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq.", Science, 2015 Mar 6;347(6226):1138-42
Submission	Registration date: 12-Aug-2014 Molecular Neurobiology, Medical Biochemistry and Biophysics, Karolinska Institutet
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	3005
Publications
PubMed	2
PMC	1
Other datasets
BioSample	3005
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	11

SRA Data Details

Parameter	Value
Data volume, Gbases	342
Data volume, Tbytes	0.34

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Mus musculus (house mouse)

Single-cell RNA-seq of mouse cerebral cortex

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