Oryza sativa Japonica Group (ID 243371) - BioProject

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Accession: PRJNA243371 ID: 243371

Oryza sativa Japonica Group (Japanese rice)

Transcriptome profiling of various organs at different developmental stages in rice (single-end)

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To identificate long noncoding RNAs in rice, we profiled transcriptome of various organs at different developmental stages using stranded single-end RNA-seq based on poly(A) selection. More...

Accession	PRJNA243371; GEO: GSE56463
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Oryza sativa Japonica Group[Taxonomy ID: 39947] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa Japonica Group
Publications	Wang H et al., "Analysis of non-coding transcriptome in rice and maize uncovers roles of conserved lncRNAs associated with agriculture traits.", Plant J, 2015 Oct;84(2):404-16
Submission	Registration date: 2-Apr-2014 Chua Nam-Hai, The Rockefeller University
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	8
Publications
PubMed	1
Other datasets
BioSample	8
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	2

SRA Data Details

Parameter	Value
Data volume, Gbases	49
Data volume, Mbytes	32717

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Oryza sativa Japonica Group (Japanese rice)

Transcriptome profiling of various organs at different developmental stages in rice (single-end)

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