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Accession: PRJNA182746 ID: 182746

Arabidopsis thaliana (thale cress)

Genome-wide profiling of long non-coding RNAs in Arabidopsis

See Genome Information for Arabidopsis thaliana
We developed a stringent selection pipeline for lncRNA identification, combining high-throughput RNA sequencing and computational approaches. More...
AccessionPRJNA182746; GEO: GSE42695
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsZhao X et al., "Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA.", Nat Commun, 2018 Nov 29;9(1):5056
SubmissionRegistration date: 3-Dec-2012
Yijun Qi's lab, National Institute of Biological Sciences
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes314
SRA Data Details
ParameterValue
Data volume, Gbases31
Data volume, Mbytes20217

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    Genome-wide profiling of long non-coding RNAs in Arabidopsis
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