This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA139283; GEO: GSE28500 |
| Type | Umbrella project |
| Publications | Xu Y et al., "Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells.", Mol Cell, 2011 May 20;42(4):451-64 |
| Submission | Registration date: 21-Apr-2011
Fudan Univ, Shanghai, China |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 16 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 18 |
| GEO DataSets | 4 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 225505 |
| Data volume, Processed Mbytes | 4 |
| Data volume, Supplementary Mbytes | 1686 |
| Parameter | Value |
|---|
| Data volume, Gbases | 17 |
| Data volume, Mbytes | 9356 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA143029 | Mus musculus | Genome-wide Regulation of 5hmC, 5mC and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells (bisulfite sequencing data) (Fudan Univ, Shanghai, China) |
|
| Other | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA143027 | Mus musculus | Genome-wide Regulation of 5hmC, 5mC and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells (ChIP-seq data) (Fudan Univ, Shanghai, China) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA143039 | Mus musculus | Genome-wide Regulation of 5hmC, 5mC and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells (expression data) (Fudan Univ, Shanghai, China) |
|