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Accession: PRJNA109479 ID: 109479

Global gene-expression analyses of the Esrrb reprogrammed cells and Esrrb knockdown cells

In the murine system, Oct4, Sox2, c-Myc and Klf4 are sufficient to convert fibroblasts to induced pluripotent stem (iPS) cells that exhibit many characteristics of embryonic stem (ES) cells. Herein, we show that the orphan nuclear receptor Esrrb works in conjunction with Oct4 and Sox2 to mediate reprogramming of mouse embryonic fibroblasts (MEFs) to iPS cells. Esrrb reprogrammed cells share similar expression and epigenetic signatures as ES cells. These cells are also pluripotent and can differentiate in vitro and in vivo into the three major embryonic cell lineages. Furthermore, these cells contribute to mouse chimeras and are germline transmissible. In ES cells, Esrrb targets many genes involved in selfrenewal and pluripotency. This suggests that Esrrb may mediate reprogramming through the up-regulation of ES cell-specific genes. More...
AccessionPRJNA109479; GEO: GSE13190
TypeUmbrella project
PublicationsFeng B et al., "Reprogramming of fibroblasts into induced pluripotent stem cells with orphan nuclear receptor Esrrb.", Nat Cell Biol, 2009 Feb;11(2):197-203
SubmissionRegistration date: 15-Jan-2009
Genome Institute of Singapore
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Project Data:
Resource NameNumber
of Links
Publications
PubMed1
Other datasets
GEO DataSets3
GEO Data Details
ParameterValue
Data volume, Spots1585488
Data volume, Processed Mbytes45
Data volume, Supplementary Mbytes59
This project encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Transcriptome or Gene expression2
BioProject
accession
OrganismTitle
PRJNA114035Mus musculusGlobal gene-expression analyses of the Esrrb reprogrammed cells (Genome Institute of Singapore)
PRJNA114037Mus musculusGlobal gene-expression analyses of the Esrrb knockdown cells (Genome Institute of Singapore)

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