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Items: 19

1.

The genomic history and global expansion of domestic donkeys

Ancient and modern genomes elucidate the origins, spread and management practices underlying donkey domestication.

Project data type: Other
Scope:
Monoisolate
CNRS UMR 5288
Accession:
PRJEB52849
ID:
879017
2.

Equus burchellii quagga RefSeq BioProject

Equus quagga burchellii RefSeq Genome sequencing

Organism:
Equus quagga burchellii
Taxonomy:
Equus quagga burchellii (Burchell's zebra)
Project data type: RefSeq Genome sequencing
Scope:
Monoisolate
NCBI
Accession:
PRJNA805220
ID:
805220
3.

Centromeres of Burchell's and Grevy's zebras

Project data type: Raw sequence reads
Scope:
Multispecies
University of Pavia
Accession:
PRJNA804871
ID:
804871
4.

Equus quagga burchellii

Equus quagga burchellii Genome sequencing and assembly

Taxonomy:
Equus quagga burchellii (Burchell's zebra)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
University of California Los Angeles
Accession:
PRJNA785630
ID:
785630
5.

RNA sequencing of plains zebra biopsy samples

Project data type: Raw sequence reads
Scope:
Multispecies
University of California Los Angeles
Accession:
PRJNA782727
ID:
782727
6.

Methylation studies in plains zebras

Organism:
Equus quagga burchellii
Taxonomy:
Equus quagga burchellii (Burchell's zebra)
Project data type: Epigenomics
Scope:
Multiisolate
Horvath, Human Genetics, University of California, Los Angeles
Accession:
PRJNA763600
ID:
763600
7.

Vertebrate gut archaea 16S rRNA

Gut vertebrate gut archaeal community assessment via archaea-targeting 16S rRNA primers (arch516F-arch915R). Feces/gut-contents assessed from mostly wild animals belonging to 5 vertebrate clades: Mammalia, Aves, Reptilia, Amphibia, and Actinopterygii.

Project data type: Other
Scope:
Monoisolate
MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY
Accession:
PRJEB40672
ID:
757308
8.

animal gut metagenome assembly of five vertebrate classes

Large scale metagenome assembly reveals novel animal-associated microbial diversity

Project data type: Other
Scope:
Monoisolate
MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY
Accession:
PRJEB38078
ID:
674148
9.

Population structure, inbreeding and stripe pattern abnormalities in plains zebras

Project data type: Raw sequence reads
Scope:
Multispecies
University of California, Los Angeles
Accession:
PRJNA670933
ID:
670933
10.

DNA Zoo

Project data type: Genome sequencing and assembly
Scope:
Multispecies
DNA Zoo
Accession:
PRJNA512907
ID:
512907
11.

Equus quagga burchellii isolate:Ert-1

Equus quagga burchellii isolate:Ert-1 Transcriptome or Gene expression

Organism:
Equus quagga burchellii
Taxonomy:
Equus quagga burchellii (Burchell's zebra)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Inner Mongolian Agricultural University
Accession:
PRJNA484594
ID:
484594
12.

Equidae; Equus; Equus burchellii

Equus burchellii Transcriptome

Organism:
Equus quagga burchellii
Taxonomy:
Equus quagga burchellii (Burchell's zebra)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Inner Mongolian Agricultural University
Accession:
PRJNA484551
ID:
484551
13.

Equus quagga burchellii isolate:Eren takhi

Equus quagga burchellii isolate:Eren takhi Genome sequencing and assembly

Organism:
Equus quagga burchellii
Taxonomy:
Equus quagga burchellii (Burchell's zebra)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Inner Mongolian Agricultural University
Accession:
PRJNA382745
ID:
382745
14.

Zonkey pipeline

Zonkey: A fast, simple, accurate and sensitive pipeline to genetically identify equid F1-hybrids in archaeological assemblages

Project data type: Other
Scope:
Monoisolate
CENTRE FOR GEOGENETICS
Accession:
PRJEB15037
ID:
377650
15.

Multiple equids, modern and historical. Genome sequencing

Project data type: Genome sequencing
Scope:
Multispecies
Natural History Museum of Denmark
Accession:
PRJNA277030
ID:
277030
16.

Equids

Speciation with gene flow in equids despite extensive chromosomal plasticity

Project data type: Other
Scope:
Monoisolate
CENTRE FOR GEOGENETICS
Accession:
PRJEB7446
ID:
269032
17.

We sequenced the genome of each living member of the non-caballine equids, and also that of the extinct quagga zebra. Genome sequencing

Project data type: Genome sequencing
Scope:
Multispecies
Natural History Museum of Denmark
Accession:
PRJNA262842
ID:
262842
18.

Equus quagga burchellii

Equus burchellii quagga RefSeq Genome

Taxonomy:
Equus quagga burchellii (Burchell's zebra)
Project data type: RefSeq Genome
Scope:
Monoisolate
NCBI
Accession:
PRJNA247482
ID:
247482
19.

Equus quagga burchellii

Equus quagga burchellii Genome sequencing

Taxonomy:
Equus quagga burchellii (Burchell's zebra)
Project data type: Genome sequencing
Scope:
Monoisolate
Centre for GeoGenetics
Accession:
PRJNA217294
ID:
217294

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